HHsearch alignment for GI: 254780262 and conserved domain: COG0051
>COG0051 RpsJ Ribosomal protein S10 [Translation, ribosomal structure and biogenesis].
Probab=100.00 E-value=7.1e-40 Score=253.55 Aligned_cols=101 Identities=56% Similarity=0.878 Sum_probs=98.8
Q ss_pred CCEEEEEEEEEECHHHHHHHHHHHHHHHHHHCCEECCCCCCCCEEEEEEEECCCCCCCCCHHHHHEEEEEEEEEEECCCH
Q ss_conf 86489999997168899999999999999718801156489821369987306789863142352233445787976998
Q gi|254780262|r 4 RNIRICICLKAFDSRILDSSMREIVLTTKKSGSQIVGPIPFPRSIRRFTVNRSPHVDKKSRDQLEMRIYKRLLYIIKPTP 83 (104)
Q Consensus 4 ~~~kirIkl~s~d~~~Ld~~~~~i~~~a~~~g~~v~GpipLPtk~~~~tvlrSPhv~KksreqfE~r~hkRlI~i~~~~~ 83 (104)
T Consensus 2 ~~~kirI~L~s~d~~~LD~~~~~Ive~akrtg~~v~GPiPLPTk~~~~tvlrsP~~~k~s~e~fEmr~HkRlidi~~~~~ 81 (104)
T COG0051 2 KKQKIRIRLKSFDHRLLDQVCREIVETAKRTGADVKGPIPLPTKRERVTVLRSPHGEKDSREQFEMRTHKRLIDIVDPTP 81 (104)
T ss_pred CCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCEEEEEEEECCCCCCCHHHHHHHHEEEEEEEEECCCH
T ss_conf 97459999861887789999999999999729803388569971289998767887874077762201106888646997
Q ss_pred HHHHHHHCCCCCCCCEEEEEC
Q ss_conf 999998647899984589989
Q gi|254780262|r 84 QTVDALMKLDIAAGVNVVIKL 104 (104)
Q Consensus 84 ~~~~~l~~~~lp~gV~i~i~~ 104 (104)
T Consensus 82 ~~~~~Lm~i~~p~gV~vei~~ 102 (104)
T COG0051 82 KTVDALMRLDLPAGVDVEIKL 102 (104)
T ss_pred HHHHHHHCCCCCCCCEEEEEE
T ss_conf 999998622589995599997