HHsearch alignment of GI: 254780262 and MMDB domain: 3i1m_J_
>3i1m_J (J:) 30S ribosomal protein S10; ribosome structure, protein-RNA complex, ribonucleoprotein, ribosomal protein, RNA-binding, rRNA-binding, antibiotic resistance; 3.19A {Escherichia coli k-12} PDB: 1p6g_J 1p87_J* 1vs7_J* 2avy_J 2aw7_J 1vs5_J 2i2u_J 2i2p_J* 2qan_J* 2qb9_J* 2qbb_J* 2qbd_J 2qbf_J 2qbh_J* 2qbj_J* 2qou_J* 2qow_J* 2qoy_J* 2qp0_J* 2vho_J ...
Probab=100.00 E-value=2.3e-35 Score=226.80 Aligned_cols=101 Identities=56% Similarity=0.849 Sum_probs=98.7
Q ss_pred CCEEEEEEEEEECHHHHHHHHHHHHHHHHHHCCEECCCCCCCCEEEEEEEECCCCCCCCCHHHHHEEEEEEEEEEECCCH
Q ss_conf 86489999997168899999999999999718801156489821369987306789863142352233445787976998
Q gi|254780262|r 4 RNIRICICLKAFDSRILDSSMREIVLTTKKSGSQIVGPIPFPRSIRRFTVNRSPHVDKKSRDQLEMRIYKRLLYIIKPTP 83 (104)
Q Consensus 4 ~~~kirIkl~s~d~~~Ld~~~~~i~~~a~~~g~~v~GpipLPtk~~~~tvlrSPhv~KksreqfE~r~hkRlI~i~~~~~ 83 (104)
+.++|+|+|+|||+..||++|++|.++|+++|+.++||+||||++.+||++||||++||||||||+|+|+|+|+|+++++
T Consensus 2 ~~~~i~I~l~S~d~~~Le~~~~~i~~~a~~~~~~v~gp~~lPtk~~~~tvlrSphv~kksreqfe~r~~kR~i~i~~~~~ 81 (103)
T 3i1m_J 2 QNQRIRIRLKAFDHRLIDQATAEIVETAKRTGAQVRGPIPLPTRKERFTVLISPHVNKDARDQYEIRTHLRLVDIVEPTE 81 (103)
T ss_dssp ---CBCCEEEESCHHHHHHHHHHHHHHHHHHSCCCCCCCCCCCEEEEEEECCSSSSCTTCCEEEEEEEEEECCCBSCCCH
T ss_pred CCCEEEEEEEECCHHHHHHHHHHHHHHHHHCCCEECCCCCCCCEEEEEEEEECCCCCCCHHHHHHHEEEEEEEEEECCCH
T ss_conf 97769999996378899999999999999839925167789848889999737889985789710515279999978998
Q ss_pred HHHHHHHCCCCCCCCEEEEEC
Q ss_conf 999998647899984589989
Q gi|254780262|r 84 QTVDALMKLDIAAGVNVVIKL 104 (104)
Q Consensus 84 ~~~~~l~~~~lp~gV~i~i~~ 104 (104)
++++.|+++++|+||+|+|++
T Consensus 82 ~~~~~~l~~~~p~GV~i~v~v 102 (103)
T 3i1m_J 82 KTVDALMRLDLAAGVDVQISL 102 (103)
T ss_dssp HHHHHHTTCCCCSSCEEECCC
T ss_pred HHHHHHHCCCCCCCCEEEEEE
T ss_conf 999998678899994699997