HHsearch results for GI: 254780262 and protein with PDBid: 3jyv_J

>3jyv_J 40S ribosomal protein S20; eukaryotic ribosome, RACK1 protein, flexible fitting; HET: 2MG H2U M2G OMC OMG YYG PSU 5MC 7MG 5MU 1MA; 8.90A {Thermomyces lanuginosus} PDB: 1s1h_J
Probab=100.00  E-value=5e-36  Score=229.83  Aligned_cols=95  Identities=25%  Similarity=0.459  Sum_probs=91.4

Q ss_pred             EEEEEEEEECHHHHHHHHHHHHHHHHHHCCEECCCCCCCCEEEEEEEECCCCCC-CCCHHHHHEEEEEEEEEEECCCHHH
Q ss_conf             899999971688999999999999997188011564898213699873067898-6314235223344578797699899
Q gi|254780262|r    7 RICICLKAFDSRILDSSMREIVLTTKKSGSQIVGPIPFPRSIRRFTVNRSPHVD-KKSRDQLEMRIYKRLLYIIKPTPQT   85 (104)
Q Consensus         7 kirIkl~s~d~~~Ld~~~~~i~~~a~~~g~~v~GpipLPtk~~~~tvlrSPhv~-KksreqfE~r~hkRlI~i~~~~~~~   85 (104)
                      ||||+|+|||++.||.+|++|+++|+.+|+.++||+||||++++||++||||++ |+||||||||+|||+|+|+++ +++
T Consensus         1 kirI~L~S~d~~~Ld~~~~~I~~~a~~~g~~~~GPipLPtk~~~~tvlrSPhvd~kksreqfE~r~hkRlI~i~~~-~~~   79 (96)
T 3jyv_J            1 KIRITLTSTKVKQLENVSSNIVKNAEQHNLVKKGPVRLPTKVLKISTRKTPNGEGSKTWETYEMRIHKRYIDLEAP-VQI   79 (96)
T ss_dssp             CBCCEEEESSHHHHHHHHHHHHHHTCSSSCCEEECCCCCCCCCCEEECSSCSSSCSSCCEEECCCCEEECCEECCC-SGG
T ss_pred             CEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHEEEEEEEEEEEEECC-HHH
T ss_conf             9899999678779999999999999980994258734996168999871787899967687799987899998687-899


Q ss_pred             HHHHHCCCCCCCCEEEE
Q ss_conf             99986478999845899
Q gi|254780262|r   86 VDALMKLDIAAGVNVVI  102 (104)
Q Consensus        86 ~~~l~~~~lp~gV~i~i  102 (104)
                      +++||++++|+||+|||
T Consensus        80 ~~~l~~~~lp~gV~iei   96 (96)
T 3jyv_J           80 VKRITQITIEPGVDVEV   96 (96)
T ss_dssp             GSGGGGCCCCTTSEEEC
T ss_pred             HHHHHCCCCCCCCEEEC
T ss_conf             99986898999936869