HHsearch results for GI: 254780262 and protein with PDBid: 3ofo_J
>3ofo_J 30S ribosomal protein S10; protein biosynthesis, ribosomes, RNA, tRNA, transfer, eryThr ketolide, macrolide, antibiotic, EXIT, peptidyl; 3.10A {Escherichia coli} PDB: 3fih_J* 2wwl_J 3ofp_J 3i1m_J 1p6g_J 1p87_J* 1vs7_J* 2avy_J 2aw7_J 1vs5_J 2i2u_J 2i2p_J* 2qan_J* 2qb9_J* 2qbb_J* 2qbd_J 2qbf_J 2qbh_J* 2qbj_J* 2qou_J* ...
Probab=100.00 E-value=7.6e-39 Score=246.25 Aligned_cols=98 Identities=57% Similarity=0.863 Sum_probs=96.4
Q ss_pred EEEEEEEEECHHHHHHHHHHHHHHHHHHCCEECCCCCCCCEEEEEEEECCCCCCCCCHHHHHEEEEEEEEEEECCCHHHH
Q ss_conf 89999997168899999999999999718801156489821369987306789863142352233445787976998999
Q gi|254780262|r 7 RICICLKAFDSRILDSSMREIVLTTKKSGSQIVGPIPFPRSIRRFTVNRSPHVDKKSRDQLEMRIYKRLLYIIKPTPQTV 86 (104)
Q Consensus 7 kirIkl~s~d~~~Ld~~~~~i~~~a~~~g~~v~GpipLPtk~~~~tvlrSPhv~KksreqfE~r~hkRlI~i~~~~~~~~ 86 (104)
||||+|+|||+..||++|++|+++|+.+|+.++||+||||++++||++||||+||+||||||||+|+|+|+|++++++++
T Consensus 1 kirIkL~s~d~~~Ld~~~~~i~~~a~~~g~~~~GPipLPtk~~~~tvlrSphv~kksreqfE~r~hkR~i~i~~~~~~~~ 80 (98)
T 3ofo_J 1 RIRIRLKAFDHRLIDQATAEIVETAKRTGAQVRGPIPLPTRKERFTVLISPHVNKDARDQYEIRTHLRLVDIVEPTEKTV 80 (98)
T ss_dssp CBCCEEEESCHHHHHHHHHHHHTTTTTTSCCCCCCCCCCEEEEEEEECCSSSSCTTCCEEEEEEEEEECCCBSCCCHHHH
T ss_pred CEEEEEEECCHHHHHHHHHHHHHHHHHHCCEEECCCCCCCEEEEEEEEECCCCCCCCCEEEEEEEEEEEEEEECCCHHHH
T ss_conf 98999996178899999999999999839947657789976689998517889997220689999889999968998999
Q ss_pred HHHHCCCCCCCCEEEEEC
Q ss_conf 998647899984589989
Q gi|254780262|r 87 DALMKLDIAAGVNVVIKL 104 (104)
Q Consensus 87 ~~l~~~~lp~gV~i~i~~ 104 (104)
+.||++++|+||+|+|+|
T Consensus 81 ~~l~~~~lP~GV~i~i~l 98 (98)
T 3ofo_J 81 DALMRLDLAAGVDVQISL 98 (98)
T ss_dssp HHHTTCCCCSSCEEECCC
T ss_pred HHHHCCCCCCCCEEEEEC
T ss_conf 998668899981799979