HHSEARCH alignment of GI: 254780262 and SCOP domain: d2qalj1

Alignment

Probab=100.00  E-value=2.4e-39  Score=247.82  Aligned_cols=98  Identities=57%  Similarity=0.863  Sum_probs=96.6

Q ss_pred             EEEEEEEEECHHHHHHHHHHHHHHHHHHCCEECCCCCCCCEEEEEEEECCCCCCCCCHHHHHEEEEEEEEEEECCCHHHH
Q ss_conf             89999997168899999999999999718801156489821369987306789863142352233445787976998999
Q gi|254780262|r    7 RICICLKAFDSRILDSSMREIVLTTKKSGSQIVGPIPFPRSIRRFTVNRSPHVDKKSRDQLEMRIYKRLLYIIKPTPQTV   86 (104)
Q Consensus         7 kirIkl~s~d~~~Ld~~~~~i~~~a~~~g~~v~GpipLPtk~~~~tvlrSPhv~KksreqfE~r~hkRlI~i~~~~~~~~   86 (104)
                      ||||+|+|||+++||++|++|+++|+.+|++++||+||||++++|||+||||++|+||||||||+|||+|+|++++++++
T Consensus         1 kirI~L~s~d~~~Ld~~~~~i~~~a~~~g~~v~GPiplPtk~~~~tvlrSPh~~kksreqfE~r~hkRli~i~~~~~~~~   80 (98)
T d2qalj1           1 RIRIRLKAFDHRLIDQATAEIVETAKRTGAQVRGPIPLPTRKERFTVLISPHVNKDARDQYEIRTHLRLVDIVEPTEKTV   80 (98)
T ss_dssp             CBEECEEESSHHHHHHHHHHHHHHHTTSSCCCCBCCCCCCEEEEEEECCSSSSCTTCCEEEEEEEEEECBCBSSCCHHHH
T ss_pred             CEEEEEEEECHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEEEEECCCCCCCHHHHEEEEEEEEEEEEECCCHHHH
T ss_conf             98999996068899999999999999819917888789958889999856999995166116015389999988998999


Q ss_pred             HHHHCCCCCCCCEEEEEC
Q ss_conf             998647899984589989
Q gi|254780262|r   87 DALMKLDIAAGVNVVIKL  104 (104)
Q Consensus        87 ~~l~~~~lp~gV~i~i~~  104 (104)
                      ++||++++|+||+|+|+|
T Consensus        81 ~~l~~~~lp~GV~i~i~l   98 (98)
T d2qalj1          81 DALMRLDLAAGVDVQISL   98 (98)
T ss_dssp             HHTTTSCCCSSCCCCEEC
T ss_pred             HHHHCCCCCCCCEEEEEC
T ss_conf             998668899981799979

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Ribosomal protein S10
family: Ribosomal protein S10
domain: Ribosomal protein S10
species: Escherichia coli [TaxId: 562]