HHsearch alignment for GI: 254780263 and conserved domain: CHL00071

>CHL00071 tufA elongation factor Tu.
Probab=100.00  E-value=0  Score=725.86  Aligned_cols=391  Identities=56%  Similarity=0.923  Sum_probs=355.6

Q ss_pred             CCHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHH----HCCCCCCCCHHHHHCCCEEEEEEEEEECCCEEEEEE
Q ss_conf             9612421038827999990468988789999998764442----001312686869862920637899982199089998
Q gi|254780263|r    1 MVEKRYVRNKESLGLSTIGHVDHGKTTLTAAITKYYSEEK----KEYGDIDSAPEEKLRGITIATAHVSYETDKRFYSHI   76 (392)
Q Consensus         1 m~~~~~~~~k~~~ni~~iGhvd~GKSTL~~~L~~~~~~~~----~~~~~~D~~~~E~~rGiTi~~~~~~~~~~~~~i~ii   76 (392)
T Consensus         1 ~~~~~~~~~k~~vni~~~GHVD~GKSTL~g~L~~~~~~~~~~~~~~~~~~D~~~eEr~rGiTid~~~~~~et~~~~~~~i   80 (409)
T CHL00071          1 MAREKFERKKPHVNIGTIGHVDHGKTTLTAAITMTLAANGGAKGKKYDEIDSAPEEKARGITINTAHVEYETENRHYAHV   80 (409)
T ss_pred             CCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHCCCEEEECEEEEECCCEEEEEE
T ss_conf             96000368998699999954588399999998645300451334315532379768736944880248996287599998


Q ss_pred             ECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCCCCCEEEEE
Q ss_conf             47873024677987740023314520123443321067788886318760233100233356122211012321001110
Q gi|254780263|r   77 DCPGHADYVKNMITGATQADGAILVCAAEDGPKPQTREHILLARQIGISSIVVYMNKVDAVDDDELLDISEYEIRDLLKE  156 (392)
Q Consensus        77 D~PGH~~f~~~mi~g~~~~D~ailvVda~~G~~~QT~eh~~l~~~lgi~~iIv~iNKmD~v~~~~~~~~i~~~i~~~l~~  156 (392)
T Consensus        81 D~PGH~~fv~nmi~Gas~aD~alLVV~A~~G~~~QTkEHl~l~~~lgV~~~IVavnKmD~v~~~~~~e~i~~~i~~~l~~  160 (409)
T CHL00071         81 DCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTKEHILLAKQVGVPNIVVFLNKEDQVDDEELLELVELEVRELLDK  160 (409)
T ss_pred             ECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             67967899999875230158128999868788500499999999739993655555679854899999999999999997


Q ss_pred             EEEEE-EEECCCCEEEEEEECCC-------CCCCCCCC-CCHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEE
Q ss_conf             14532-21023311467641144-------45652123-32034431025222210000110000000135544543014
Q gi|254780263|r  157 HKYSD-DTPIIRGSALCALQGTN-------KELGEDSI-HALMKAVDTHIPTPQRSLDAPFLMHIEGSCGIEGRGTVVTG  227 (392)
Q Consensus       157 ~~~~~-~~pii~~sa~~g~~~~n-------~~~~~~~~-~~Ll~~i~~~~~~p~~~~~~p~r~~I~~vf~i~g~G~Vv~G  227 (392)
T Consensus       161 ~g~~~~~i~~vp~sa~~~~~~~~~~~~~~~~~~~w~~~~~~Ll~~l~~~~p~~~r~~~~p~r~~Id~vf~v~G~GtVv~G  240 (409)
T CHL00071        161 YDFPGDEIPIVAGSALLALEALIENPKIKRGENKWVDKIYNLMDAVDSYIPTPERDTDKPFLMAIEDVFSITGRGTVATG  240 (409)
T ss_pred             CCCCCCCCEEEECCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCEEECCCCEEEEEE
T ss_conf             39984556089652133234312587545565612447999999887237788887677606442214753897889999


Q ss_pred             EEEECCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCEEECHHEEECCCCCCCCEEEEEEE
Q ss_conf             87424534896799950687432125412100121144321001366641124543220211773267776300016899
Q gi|254780263|r  228 CIKRGRIKAGSDVEIIGMGGKKLKVKCTDVEMFRKKLDEAIAGDNVGLLLRGVNRADVPRGRVVCAPGSIQEYSRFRASV  307 (392)
Q Consensus       228 rV~sG~l~~Gd~i~i~p~~~~~~~~kv~si~~~~~~v~~a~aGd~v~l~Lkgi~~~di~rGdvl~~~~~~~~~~~f~A~i  307 (392)
T Consensus       241 ~v~sG~v~~Gd~v~i~~~~-~~~~~~VksI~~~~~~~~~a~aG~~v~l~L~gi~~~~I~rG~VL~~p~~~~~~~~F~A~I  319 (409)
T CHL00071        241 RIERGTVKVGDTVEIVGLR-ETRTTTVTGLEMFQKTLDEGLAGDNVGILLRGIQKEDIERGMVLAKPGTITPHTKFEAQV  319 (409)
T ss_pred             EEEECCCCCCCEEEEEECC-CCCEEEEEEEEECCCCCCEECCCCEEEEEECCCCHHHCCCEEEEECCCCCCCCEEEEEEE
T ss_conf             9914563499989999769-986079999998895988887998899997599878877468996899998731999999


Q ss_pred             EEEECCCCCCCCCCCCCCEEEEEECCEEEEEEEEEC-----CCHHHHCCCCEEEEEEEECCCEEECCCCEEEEEECCEEE
Q ss_conf             971056787555511597899995414777999961-----895570789769999997781775469849999899699
Q gi|254780263|r  308 YILTASEGGRTTGFMDNYRPQFFMDTADVTGRIILS-----PGSQAVMPGDRVDLEVELIYPIAMEPNQTFSMREGGKTV  382 (392)
Q Consensus       308 ~il~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~~-----~~~~~i~~g~~~~v~l~l~~pi~~e~~~rfilRd~~~ti  382 (392)
T Consensus       320 ~iL~~~~~~~~~pi~~g~~~~lh~~t~~~~~~I~~l~~~~~~~~~~l~~Gd~a~v~~~l~~Pi~ie~g~RfilRd~g~Ti  399 (409)
T CHL00071        320 YILTKEEGGRHTPFFPGYRPQFYVRTTDVTGKIESFTADDGSKAEMVMPGDRIKMTVELIYPIAIEKGMRFAIREGGRTV  399 (409)
T ss_pred             EEEECCCCCCCCCCCCCCEEEEEEEEEEEEEEEEEEECCCCCCCCEECCCCEEEEEEEECCCEEECCCCEEEEEECCEEE
T ss_conf             99867667765531589758999985499999999603577786173689989999998940887659989999899889


Q ss_pred             EEEEEEEEEC
Q ss_conf             9899955319
Q gi|254780263|r  383 GAGLILEIIE  392 (392)
Q Consensus       383 g~G~I~~v~e  392 (392)
T Consensus       400 g~G~V~~v~~  409 (409)
T CHL00071        400 GAGVVSKIIK  409 (409)
T ss_pred             EEEEEEEEEC
T ss_conf             9999999869