HHsearch alignment for GI: 254780263 and conserved domain: COG0050

>COG0050 TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis].
Probab=100.00  E-value=0  Score=673.49  Aligned_cols=389  Identities=61%  Similarity=0.981  Sum_probs=370.3

Q ss_pred             CCHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHH----HHCCCCCCCCHHHHHCCCEEEEEEEEEECCCEEEEEE
Q ss_conf             961242103882799999046898878999999876444----2001312686869862920637899982199089998
Q gi|254780263|r    1 MVEKRYVRNKESLGLSTIGHVDHGKTTLTAAITKYYSEE----KKEYGDIDSAPEEKLRGITIATAHVSYETDKRFYSHI   76 (392)
Q Consensus         1 m~~~~~~~~k~~~ni~~iGhvd~GKSTL~~~L~~~~~~~----~~~~~~~D~~~~E~~rGiTi~~~~~~~~~~~~~i~ii   76 (392)
T Consensus         1 mak~kf~r~kphVNigtiGHvdHGKTTLtaAit~~la~~~~~~~~~y~~id~aPeEk~rGITIntahveyet~~rhyahV   80 (394)
T COG0050           1 MAKEKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKKGGAEAKAYDQIDNAPEEKARGITINTAHVEYETANRHYAHV   80 (394)
T ss_pred             CCHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHCCCEECCCEEEEECCCCEEEEC
T ss_conf             94455167987147878614247635289999999986324010333443048267645725401005886388148861


Q ss_pred             ECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCCCCCEEEEE
Q ss_conf             47873024677987740023314520123443321067788886318760233100233356122211012321001110
Q gi|254780263|r   77 DCPGHADYVKNMITGATQADGAILVCAAEDGPKPQTREHILLARQIGISSIVVYMNKVDAVDDDELLDISEYEIRDLLKE  156 (392)
Q Consensus        77 D~PGH~~f~~~mi~g~~~~D~ailvVda~~G~~~QT~eh~~l~~~lgi~~iIv~iNKmD~v~~~~~~~~i~~~i~~~l~~  156 (392)
T Consensus        81 DcPGHaDYvKNMItgAaqmDgAILVVsA~dGpmPqTrEHiLlarqvGvp~ivvflnK~Dmvdd~ellelVemEvreLLs~  160 (394)
T COG0050          81 DCPGHADYVKNMITGAAQMDGAILVVAATDGPMPQTREHILLARQVGVPYIVVFLNKVDMVDDEELLELVEMEVRELLSE  160 (394)
T ss_pred             CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             68974899998764077537628999847899986056420123428857999974223668689999999999999997


Q ss_pred             EEEE-EEEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEEEEECCCC
Q ss_conf             1453-221023311467641144456521233203443102522221000011000000013554454301487424534
Q gi|254780263|r  157 HKYS-DDTPIIRGSALCALQGTNKELGEDSIHALMKAVDTHIPTPQRSLDAPFLMHIEGSCGIEGRGTVVTGCIKRGRIK  235 (392)
Q Consensus       157 ~~~~-~~~pii~~sa~~g~~~~n~~~~~~~~~~Ll~~i~~~~~~p~~~~~~p~r~~I~~vf~i~g~G~Vv~GrV~sG~l~  235 (392)
T Consensus       161 y~f~gd~~Pii~gSal~ale~~~~--~~~~i~eLm~avd~yip~Per~~dkPflmpvEdvfsIsgrgtvvtGrVeRG~lk  238 (394)
T COG0050         161 YGFPGDDTPIIRGSALKALEGDAK--WEAKIEELMDAVDSYIPTPERDIDKPFLMPVEDVFSISGRGTVVTGRVERGILK  238 (394)
T ss_pred             CCCCCCCCCEEECHHHHHHCCCCC--HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEEEEEEEEC
T ss_conf             399987763341123331037721--678999999999854899986556652010100689757516898788401241


Q ss_pred             CCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCEEECHHEEECCCCCCCCEEEEEEEEEEECCCC
Q ss_conf             89679995068743212541210012114432100136664112454322021177326777630001689997105678
Q gi|254780263|r  236 AGSDVEIIGMGGKKLKVKCTDVEMFRKKLDEAIAGDNVGLLLRGVNRADVPRGRVVCAPGSIQEYSRFRASVYILTASEG  315 (392)
Q Consensus       236 ~Gd~i~i~p~~~~~~~~kv~si~~~~~~v~~a~aGd~v~l~Lkgi~~~di~rGdvl~~~~~~~~~~~f~A~i~il~~~~~  315 (392)
T Consensus       239 vg~eveivG~~-~~~kttvtgvemfrk~ld~~~aGdnvg~llRg~~r~~veRGqvLakpgsi~ph~kfeaevyvL~keeg  317 (394)
T COG0050         239 VGEEVEIVGIK-ETQKTTVTGVEMFRKLLDEGQAGDNVGVLLRGVKREDVERGQVLAKPGSIKPHTKFEAEVYVLSKEEG  317 (394)
T ss_pred             CCCEEEEECCC-CCCEEEEEHHHHHHHHHHCCCCCCCCCEEEEECCCCCEECCEEECCCCCCCCCCEEEEEEEEEECCCC
T ss_conf             58779972564-55304887699999887404668985268972111335312076068866665210489999960217


Q ss_pred             CCCCCCCCCCEEEEEECCEEEEEEEEECCCHHHHCCCCEEEEEEEECCCEEECCCCEEEEEECCEEEEEEEEEEEEC
Q ss_conf             75555115978999954147779999618955707897699999977817754698499998996999899955319
Q gi|254780263|r  316 GRTTGFMDNYRPQFFMDTADVTGRIILSPGSQAVMPGDRVDLEVELIYPIAMEPNQTFSMREGGKTVGAGLILEIIE  392 (392)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~v~~~i~~~~~~~~i~~g~~~~v~l~l~~pi~~e~~~rfilRd~~~tig~G~I~~v~e  392 (392)
T Consensus       318 grhtpff~~yrpqfyfRttDVtg~~~lpeg~emvmpgdnv~~~veLi~pia~e~G~rFaIreGgrtvgaGvV~~i~~  394 (394)
T COG0050         318 GRHTPFFHGYRPQFYFRTTDVTGAITLPEGVEMVMPGDNVKMVVELIHPIAMEEGLRFAIREGGRTVGAGVVTKIIE  394 (394)
T ss_pred             CCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCEECCCCCEEEEEEEEEEEECCCCCEEEEEECCEEEEEEEEEECCC
T ss_conf             88788646766405898401455676167850414888448999986323217887899976886651147830019