HHsearch alignment for GI: 254780263 and conserved domain: COG5256

>COG5256 TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis].
Probab=100.00  E-value=0  Score=681.37  Aligned_cols=376  Identities=37%  Similarity=0.559  Sum_probs=339.4

Q ss_pred             CCCCEEEEEEEECCCCCHHHHHHHHHH-----------HHHHHHHCCCC--------CCCCHHHHHCCCEEEEEEEEEEC
Q ss_conf             038827999990468988789999998-----------76444200131--------26868698629206378999821
Q gi|254780263|r    8 RNKESLGLSTIGHVDHGKTTLTAAITK-----------YYSEEKKEYGD--------IDSAPEEKLRGITIATAHVSYET   68 (392)
Q Consensus         8 ~~k~~~ni~~iGhvd~GKSTL~~~L~~-----------~~~~~~~~~~~--------~D~~~~E~~rGiTi~~~~~~~~~   68 (392)
T Consensus         3 ~~Kph~nl~~iGHVD~GKSTl~GrLly~~G~id~~tmeK~~~ea~~~gK~sf~fawvlD~tkeERerGvTi~~~~~~fet   82 (428)
T COG5256           3 SEKPHLNLVFIGHVDAGKSTLVGRLLYDLGEIDKRTMEKLEKEAKELGKESFKFAWVLDKTKEERERGVTIDVAHSKFET   82 (428)
T ss_pred             CCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHCCEEEEEEEEEEEC
T ss_conf             87871289998378787034455657773797989999999999861977168999853886678666689977788643


Q ss_pred             CCEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCC-------CCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCH-
Q ss_conf             990899984787302467798774002331452012344-------332106778888631876023310023335612-
Q gi|254780263|r   69 DKRFYSHIDCPGHADYVKNMITGATQADGAILVCAAEDG-------PKPQTREHILLARQIGISSIVVYMNKVDAVDDD-  140 (392)
Q Consensus        69 ~~~~i~iiD~PGH~~f~~~mi~g~~~~D~ailvVda~~G-------~~~QT~eh~~l~~~lgi~~iIv~iNKmD~v~~~-  140 (392)
T Consensus        83 ~k~~~tIiDaPGHrdFvknmItGasqAD~aVLVV~a~~~efE~g~~~~gQtrEH~~La~tlGi~~lIVavNKMD~v~wde  162 (428)
T COG5256          83 DKYNFTIIDAPGHRDFVKNMITGASQADVAVLVVDARDGEFEAGFGVGGQTREHAFLARTLGIKQLIVAVNKMDLVSWDE  162 (428)
T ss_pred             CCCEEEEEECCCHHHHHHHHHCCHHHCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCH
T ss_conf             77058996078467789876313313367999998889831014365875167899998569756999997156666279


Q ss_pred             HHHHHCCCCCCEEEEEEEEEE-EEECCCCEEEEEEECC--CCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCEECCCCCC
Q ss_conf             221101232100111014532-2102331146764114--4456521233203443102522221000011000000013
Q gi|254780263|r  141 ELLDISEYEIRDLLKEHKYSD-DTPIIRGSALCALQGT--NKELGEDSIHALMKAVDTHIPTPQRSLDAPFLMHIEGSCG  217 (392)
Q Consensus       141 ~~~~~i~~~i~~~l~~~~~~~-~~pii~~sa~~g~~~~--n~~~~~~~~~~Ll~~i~~~~~~p~~~~~~p~r~~I~~vf~  217 (392)
T Consensus       163 ~rf~ei~~~v~~l~k~~G~~~~~v~FIPiSg~~G~Nl~~~s~~~pWY~GpTLleaLd-~~~~p~~~~d~Plr~pI~~v~~  241 (428)
T COG5256         163 ERFEEIVSEVSKLLKMVGYNPKDVPFIPISGFKGDNLTKKSENMPWYKGPTLLEALD-QLEPPERPLDKPLRLPIQDVYS  241 (428)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHH-CCCCCCCCCCCCEEEEEEEEEE
T ss_conf             999999999999999719986677079622446776332676786724871898974-5578987778881768001787


Q ss_pred             CCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCEEECHHEEECCCCC
Q ss_conf             55445430148742453489679995068743212541210012114432100136664112454322021177326777
Q gi|254780263|r  218 IEGRGTVVTGCIKRGRIKAGSDVEIIGMGGKKLKVKCTDVEMFRKKLDEAIAGDNVGLLLRGVNRADVPRGRVVCAPGSI  297 (392)
Q Consensus       218 i~g~G~Vv~GrV~sG~l~~Gd~i~i~p~~~~~~~~kv~si~~~~~~v~~a~aGd~v~l~Lkgi~~~di~rGdvl~~~~~~  297 (392)
T Consensus       242 i~~~gtv~vGrVEsG~i~~g~~v~~~p~~---~~~evksie~~~~~~~~a~~GD~i~~~vrgv~~~dI~~Gdv~~~~~n~  318 (428)
T COG5256         242 ISGIGTVPVGRVESGVIKPGQKVTFMPAG---VVGEVKSIEMHHEEISQAEPGDNVGFNVRGVEKNDIRRGDVIGHSDNP  318 (428)
T ss_pred             ECCCCEEEEEEEEEEEECCCCEEEEECCC---CEEEEEEEEECCCCCCCCCCCCEEEEEECCCCHHCCCCCCEECCCCCC
T ss_conf             16885478878861345169879996486---127876456126654447898768898357754316776574047888


Q ss_pred             CC-CEEEEEEEEEEECCCCCCCCCCCCCCEEEEEECCEEEEEEEE-------------ECCCHHHHCCCCEEEEEEEECC
Q ss_conf             63-000168999710567875555115978999954147779999-------------6189557078976999999778
Q gi|254780263|r  298 QE-YSRFRASVYILTASEGGRTTGFMDNYRPQFFMDTADVTGRII-------------LSPGSQAVMPGDRVDLEVELIY  363 (392)
Q Consensus       298 ~~-~~~f~A~i~il~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~-------------~~~~~~~i~~g~~~~v~l~l~~  363 (392)
T Consensus       319 ~t~~~~f~a~i~vl~-----~p~~i~~Gyt~vlh~hta~~a~~i~~l~~k~d~~t~k~~~~~p~f~k~g~~~iv~i~~~k  393 (428)
T COG5256         319 PTVSPEFTAQIIVLW-----HPGIITSGYTPVLHAHTAQVACRIAELLSKLDPRTGKKLEENPQFLKRGDAAIVKIEPEK  393 (428)
T ss_pred             CCCCCCEEEEEEEEE-----CCCCCCCCCCCEEEECCCCEEEEHHHHHHHHCCCCCCCCCCCHHHHHCCCEEEEEEEECC
T ss_conf             643513167899980-----676324787617993253003357878875174324332468024425756899998247


Q ss_pred             CEEECC------CCEEEEEECCEEEEEEEEEEEEC
Q ss_conf             177546------98499998996999899955319
Q gi|254780263|r  364 PIAMEP------NQTFSMREGGKTVGAGLILEIIE  392 (392)
Q Consensus       364 pi~~e~------~~rfilRd~~~tig~G~I~~v~e  392 (392)
T Consensus       394 P~~~e~~~~~~~Lgrfalrd~g~tIA~G~v~~v~~  428 (428)
T COG5256         394 PLCLEKVSEIPQLGRFALRDMGQTIAAGKVLEVKK  428 (428)
T ss_pred             CEEEEECCCCCCCCEEEEEECCCEEEEEEEEECCC
T ss_conf             54763201077222489980797698479974169