HHsearch alignment for GI: 254780263 and conserved domain: COG5256
>COG5256 TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis].
Probab=100.00 E-value=0 Score=681.37 Aligned_cols=376 Identities=37% Similarity=0.559 Sum_probs=339.4
Q ss_pred CCCCEEEEEEEECCCCCHHHHHHHHHH-----------HHHHHHHCCCC--------CCCCHHHHHCCCEEEEEEEEEEC
Q ss_conf 038827999990468988789999998-----------76444200131--------26868698629206378999821
Q gi|254780263|r 8 RNKESLGLSTIGHVDHGKTTLTAAITK-----------YYSEEKKEYGD--------IDSAPEEKLRGITIATAHVSYET 68 (392)
Q Consensus 8 ~~k~~~ni~~iGhvd~GKSTL~~~L~~-----------~~~~~~~~~~~--------~D~~~~E~~rGiTi~~~~~~~~~ 68 (392)
T Consensus 3 ~~Kph~nl~~iGHVD~GKSTl~GrLly~~G~id~~tmeK~~~ea~~~gK~sf~fawvlD~tkeERerGvTi~~~~~~fet 82 (428)
T COG5256 3 SEKPHLNLVFIGHVDAGKSTLVGRLLYDLGEIDKRTMEKLEKEAKELGKESFKFAWVLDKTKEERERGVTIDVAHSKFET 82 (428)
T ss_pred CCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHCCEEEEEEEEEEEC
T ss_conf 87871289998378787034455657773797989999999999861977168999853886678666689977788643
Q ss_pred CCEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCC-------CCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCH-
Q ss_conf 990899984787302467798774002331452012344-------332106778888631876023310023335612-
Q gi|254780263|r 69 DKRFYSHIDCPGHADYVKNMITGATQADGAILVCAAEDG-------PKPQTREHILLARQIGISSIVVYMNKVDAVDDD- 140 (392)
Q Consensus 69 ~~~~i~iiD~PGH~~f~~~mi~g~~~~D~ailvVda~~G-------~~~QT~eh~~l~~~lgi~~iIv~iNKmD~v~~~- 140 (392)
T Consensus 83 ~k~~~tIiDaPGHrdFvknmItGasqAD~aVLVV~a~~~efE~g~~~~gQtrEH~~La~tlGi~~lIVavNKMD~v~wde 162 (428)
T COG5256 83 DKYNFTIIDAPGHRDFVKNMITGASQADVAVLVVDARDGEFEAGFGVGGQTREHAFLARTLGIKQLIVAVNKMDLVSWDE 162 (428)
T ss_pred CCCEEEEEECCCHHHHHHHHHCCHHHCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCH
T ss_conf 77058996078467789876313313367999998889831014365875167899998569756999997156666279
Q ss_pred HHHHHCCCCCCEEEEEEEEEE-EEECCCCEEEEEEECC--CCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCEECCCCCC
Q ss_conf 221101232100111014532-2102331146764114--4456521233203443102522221000011000000013
Q gi|254780263|r 141 ELLDISEYEIRDLLKEHKYSD-DTPIIRGSALCALQGT--NKELGEDSIHALMKAVDTHIPTPQRSLDAPFLMHIEGSCG 217 (392)
Q Consensus 141 ~~~~~i~~~i~~~l~~~~~~~-~~pii~~sa~~g~~~~--n~~~~~~~~~~Ll~~i~~~~~~p~~~~~~p~r~~I~~vf~ 217 (392)
T Consensus 163 ~rf~ei~~~v~~l~k~~G~~~~~v~FIPiSg~~G~Nl~~~s~~~pWY~GpTLleaLd-~~~~p~~~~d~Plr~pI~~v~~ 241 (428)
T COG5256 163 ERFEEIVSEVSKLLKMVGYNPKDVPFIPISGFKGDNLTKKSENMPWYKGPTLLEALD-QLEPPERPLDKPLRLPIQDVYS 241 (428)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHH-CCCCCCCCCCCCEEEEEEEEEE
T ss_conf 999999999999999719986677079622446776332676786724871898974-5578987778881768001787
Q ss_pred CCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCEEECHHEEECCCCC
Q ss_conf 55445430148742453489679995068743212541210012114432100136664112454322021177326777
Q gi|254780263|r 218 IEGRGTVVTGCIKRGRIKAGSDVEIIGMGGKKLKVKCTDVEMFRKKLDEAIAGDNVGLLLRGVNRADVPRGRVVCAPGSI 297 (392)
Q Consensus 218 i~g~G~Vv~GrV~sG~l~~Gd~i~i~p~~~~~~~~kv~si~~~~~~v~~a~aGd~v~l~Lkgi~~~di~rGdvl~~~~~~ 297 (392)
T Consensus 242 i~~~gtv~vGrVEsG~i~~g~~v~~~p~~---~~~evksie~~~~~~~~a~~GD~i~~~vrgv~~~dI~~Gdv~~~~~n~ 318 (428)
T COG5256 242 ISGIGTVPVGRVESGVIKPGQKVTFMPAG---VVGEVKSIEMHHEEISQAEPGDNVGFNVRGVEKNDIRRGDVIGHSDNP 318 (428)
T ss_pred ECCCCEEEEEEEEEEEECCCCEEEEECCC---CEEEEEEEEECCCCCCCCCCCCEEEEEECCCCHHCCCCCCEECCCCCC
T ss_conf 16885478878861345169879996486---127876456126654447898768898357754316776574047888
Q ss_pred CC-CEEEEEEEEEEECCCCCCCCCCCCCCEEEEEECCEEEEEEEE-------------ECCCHHHHCCCCEEEEEEEECC
Q ss_conf 63-000168999710567875555115978999954147779999-------------6189557078976999999778
Q gi|254780263|r 298 QE-YSRFRASVYILTASEGGRTTGFMDNYRPQFFMDTADVTGRII-------------LSPGSQAVMPGDRVDLEVELIY 363 (392)
Q Consensus 298 ~~-~~~f~A~i~il~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~-------------~~~~~~~i~~g~~~~v~l~l~~ 363 (392)
T Consensus 319 ~t~~~~f~a~i~vl~-----~p~~i~~Gyt~vlh~hta~~a~~i~~l~~k~d~~t~k~~~~~p~f~k~g~~~iv~i~~~k 393 (428)
T COG5256 319 PTVSPEFTAQIIVLW-----HPGIITSGYTPVLHAHTAQVACRIAELLSKLDPRTGKKLEENPQFLKRGDAAIVKIEPEK 393 (428)
T ss_pred CCCCCCEEEEEEEEE-----CCCCCCCCCCCEEEECCCCEEEEHHHHHHHHCCCCCCCCCCCHHHHHCCCEEEEEEEECC
T ss_conf 643513167899980-----676324787617993253003357878875174324332468024425756899998247
Q ss_pred CEEECC------CCEEEEEECCEEEEEEEEEEEEC
Q ss_conf 177546------98499998996999899955319
Q gi|254780263|r 364 PIAMEP------NQTFSMREGGKTVGAGLILEIIE 392 (392)
Q Consensus 364 pi~~e~------~~rfilRd~~~tig~G~I~~v~e 392 (392)
T Consensus 394 P~~~e~~~~~~~Lgrfalrd~g~tIA~G~v~~v~~ 428 (428)
T COG5256 394 PLCLEKVSEIPQLGRFALRDMGQTIAAGKVLEVKK 428 (428)
T ss_pred CEEEEECCCCCCCCEEEEEECCCEEEEEEEEECCC
T ss_conf 54763201077222489980797698479974169