HHsearch alignment for GI: 254780263 and conserved domain: KOG4252

Probab=96.22  E-value=0.0022  Score=40.08  Aligned_cols=133  Identities=20%  Similarity=0.210  Sum_probs=74.6

Q ss_pred             CCHHHHHCCCCEEEEEEEECCCCCHHHHHHHHH-HHHHHHHHCCCCCCCCHHHHHCCCEEEEEEEEEECCCEEEEEEECC
Q ss_conf             961242103882799999046898878999999-8764442001312686869862920637899982199089998478
Q gi|254780263|r    1 MVEKRYVRNKESLGLSTIGHVDHGKTTLTAAIT-KYYSEEKKEYGDIDSAPEEKLRGITIATAHVSYETDKRFYSHIDCP   79 (392)
Q Consensus         1 m~~~~~~~~k~~~ni~~iGhvd~GKSTL~~~L~-~~~~~~~~~~~~~D~~~~E~~rGiTi~~~~~~~~~~~~~i~iiD~P   79 (392)
T Consensus        12 m~e~d~e~a---iK~vivGng~VGKssmiqryCkgifTkdykktIgvdfle--rq--i~v-------~~Edvr~mlWdta   77 (246)
T KOG4252          12 MDETDYERA---IKFVIVGNGSVGKSSMIQRYCKGIFTKDYKKTIGVDFLE--RQ--IKV-------LIEDVRSMLWDTA   77 (246)
T ss_pred             CCCHHHHHH---EEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHH--HH--HHH-------HHHHHHHHHHHHC
T ss_conf             880324553---789998788624689999985244556654000323526--77--774-------0899999998722


Q ss_pred             CCHHHHHHHHHHHHCCCCEEEEECCCCC-CCCCHHHHHHH--HHHCCCCCEEEEECCCCCCCCHHH-HHHCCC
Q ss_conf             7302467798774002331452012344-33210677888--863187602331002333561222-110123
Q gi|254780263|r   80 GHADYVKNMITGATQADGAILVCAAEDG-PKPQTREHILL--ARQIGISSIVVYMNKVDAVDDDEL-LDISEY  148 (392)
Q Consensus        80 GH~~f~~~mi~g~~~~D~ailvVda~~G-~~~QT~eh~~l--~~~lgi~~iIv~iNKmD~v~~~~~-~~~i~~  148 (392)
T Consensus        78 gqeEfDaItkAyyrgaqa~vLVFSTTDr~SFea~~~w~~kv~~e~~~IP-tV~vqNKIDlveds~~~~~evE~  149 (246)
T KOG4252          78 GQEEFDAITKAYYRGAQASVLVFSTTDRYSFEATLEWYNKVQKETERIP-TVFVQNKIDLVEDSQMDKGEVEG  149 (246)
T ss_pred             CCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCC-EEEEECCCHHHHHHHCCHHHHHH
T ss_conf             3166778999874256404899854517778999999999998755687-58764220056765213588899