HHsearch alignment for GI: 254780263 and conserved domain: PRK00089
>PRK00089 era GTP-binding protein Era; Reviewed.
Probab=99.81 E-value=1.2e-19 Score=140.90 Aligned_cols=172 Identities=21% Similarity=0.292 Sum_probs=119.2
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEEEEEECCCEEEEEEECCCC--------HHHH
Q ss_conf 99999046898878999999876444200131268686986292063789998219908999847873--------0246
Q gi|254780263|r 14 GLSTIGHVDHGKTTLTAAITKYYSEEKKEYGDIDSAPEEKLRGITIATAHVSYETDKRFYSHIDCPGH--------ADYV 85 (392)
Q Consensus 14 ni~~iGhvd~GKSTL~~~L~~~~~~~~~~~~~~D~~~~E~~rGiTi~~~~~~~~~~~~~i~iiD~PGH--------~~f~ 85 (392)
T Consensus 10 ~VaivG~PNvGKSTL~N~l~~~k~si------VS-----~k~~TTR~~i~gi~~~~~~q~i~iDTpGi~~~~~~l~~~~~ 78 (296)
T PRK00089 10 FVAIVGRPNVGKSTLLNALVGQKISI------VS-----PKPQTTRHRIRGIVTEDDAQIIFVDTPGIHKPKRALNRAMN 78 (296)
T ss_pred EEEEECCCCCCHHHHHHHHHCCCEEE------EC-----CCCCCCCCCEEEEEEECCEEEEEEECCCCCCCHHHHHHHHH
T ss_conf 99999899988899999996896176------14-----95998728389999979979999989986674677878999
Q ss_pred HHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCCCCCEEEEEEEEEEEEEC
Q ss_conf 77987740023314520123443321067788886318760233100233356122211012321001110145322102
Q gi|254780263|r 86 KNMITGATQADGAILVCAAEDGPKPQTREHILLARQIGISSIVVYMNKVDAVDDDELLDISEYEIRDLLKEHKYSDDTPI 165 (392)
Q Consensus 86 ~~mi~g~~~~D~ailvVda~~G~~~QT~eh~~l~~~lgi~~iIv~iNKmD~v~~~~~~~~i~~~i~~~l~~~~~~~~~pi 165 (392)
T Consensus 79 ~~~~~ai~~aDlil~viD~~~~~~~~d~~i~~~l~~~~kp-~ilviNKiDlv~k~~l~~~~~-~l~~~~---~f~---~i 150 (296)
T PRK00089 79 KAAWSSLKDVDLVLFVVDADEKIGPGDEFILEKLKKVKTP-VILVLNKIDLVDKEELLPLLE-ELSELM---DFA---EI 150 (296)
T ss_pred HHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHCCCC-EEEEEEHHHHCCHHHHHHHHH-HHHHHC---CCC---EE
T ss_conf 9999999759999999857889898899999988874998-899954788428988999999-998537---976---59
Q ss_pred CCCEEEEEEECCCCCCCCCCCCCHHHHHHCCCCC------CCCCCCCCCCEECCC
Q ss_conf 3311467641144456521233203443102522------221000011000000
Q gi|254780263|r 166 IRGSALCALQGTNKELGEDSIHALMKAVDTHIPT------PQRSLDAPFLMHIEG 214 (392)
Q Consensus 166 i~~sa~~g~~~~n~~~~~~~~~~Ll~~i~~~~~~------p~~~~~~p~r~~I~~ 214 (392)
T Consensus 151 f~iSA~~~----------~gi~~L~~~l~~~lp~~~~~y~~d~~Td~~~~~~v~E 195 (296)
T PRK00089 151 VPISALKG----------DNVDELLDLIAKYLPEGPPLYPEDQITDRPERFLAAE 195 (296)
T ss_pred EEEECCCC----------CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 99967788----------8989999999986798865687301457848899999