HHsearch alignment for GI: 254780263 and conserved domain: PRK04000

>PRK04000 translation initiation factor IF-2 subunit gamma; Validated.
Probab=100.00  E-value=0  Score=608.19  Aligned_cols=354  Identities=32%  Similarity=0.488  Sum_probs=309.8

Q ss_pred             HHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEEEEEEC----------------
Q ss_conf             4210388279999904689887899999987644420013126868698629206378999821----------------
Q gi|254780263|r    5 RYVRNKESLGLSTIGHVDHGKTTLTAAITKYYSEEKKEYGDIDSAPEEKLRGITIATAHVSYET----------------   68 (392)
Q Consensus         5 ~~~~~k~~~ni~~iGhvd~GKSTL~~~L~~~~~~~~~~~~~~D~~~~E~~rGiTi~~~~~~~~~----------------   68 (392)
T Consensus         1 ~~~~~~p~vNIgtiGHVDHGKTTLv~aLTg~---------~tdr~~eE~~RGiTI~LG~a~~~~~~~~~~~~~~~~~~~~   71 (410)
T PRK04000          1 MWEFVQPEVNIGMVGHVDHGKTTLVQALTGV---------WTDTHSEELKRGITIRLGYADATIYKCPNCEGPEAYTTEP   71 (410)
T ss_pred             CCCCCCCCCEEEEEEEECCCHHHHHHHHHCC---------CCCCCHHHHHCCCCCCCCCCCEEHHCCCCCCCCCCEEEEC
T ss_conf             9877899526999965178699999887397---------5423887886488121051010012054555444135302


Q ss_pred             ----------CCEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCC-CCCHHHHHHHHHHCCCCCEEEEECCCCCC
Q ss_conf             ----------9908999847873024677987740023314520123443-32106778888631876023310023335
Q gi|254780263|r   69 ----------DKRFYSHIDCPGHADYVKNMITGATQADGAILVCAAEDGP-KPQTREHILLARQIGISSIVVYMNKVDAV  137 (392)
Q Consensus        69 ----------~~~~i~iiD~PGH~~f~~~mi~g~~~~D~ailvVda~~G~-~~QT~eh~~l~~~lgi~~iIv~iNKmD~v  137 (392)
T Consensus        72 ~~~~~~~~~~~~r~is~VD~PGHe~fi~nMi~Gas~~D~alLVVaA~eG~p~pQT~EHl~i~~~lgi~~~iV~lnK~Dlv  151 (410)
T PRK04000         72 TCPKCGSETELLRRVSFVDAPGHETLMATMLSGAALMDGAVLVIAANEPCPQPQTKEHLMALDIIGIKNIVIVQNKIDLV  151 (410)
T ss_pred             CCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCC
T ss_conf             33444555443316999979887999999984021266799998657787677149999999980998379999625678


Q ss_pred             CCHHHHHHCCCCCCEEEEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCEECCCCCC
Q ss_conf             61222110123210011101453221023311467641144456521233203443102522221000011000000013
Q gi|254780263|r  138 DDDELLDISEYEIRDLLKEHKYSDDTPIIRGSALCALQGTNKELGEDSIHALMKAVDTHIPTPQRSLDAPFLMHIEGSCG  217 (392)
Q Consensus       138 ~~~~~~~~i~~~i~~~l~~~~~~~~~pii~~sa~~g~~~~n~~~~~~~~~~Ll~~i~~~~~~p~~~~~~p~r~~I~~vf~  217 (392)
T Consensus       152 ~~e~~~~-~~~ei~~~l~g~~-~~~~piipvSa~~g~----------~i~~L~~~l~~~~~~p~r~~~~~f~m~Vdr~F~  219 (410)
T PRK04000        152 SKEKALE-NYEQIKEFVKGTV-AENAPIIPVSALHGV----------NIDALIEAIEEEIPTPERDLDKPPLMYVARSFD  219 (410)
T ss_pred             CHHHHHH-HHHHHHHHHCCCC-CCCCCEEEEECCCCC----------CCCHHHHHHHHHCCCCCCCCCCCCEEEEEEEEE
T ss_conf             9899999-9999999870676-568999996477788----------940899989862778777888994489988885


Q ss_pred             CCCCCC--------CEEEEEEECCCCCCCEEEEEECCC---------CCCCEEEECCCCCCCCCCCCCCCHHHHHHHC--
Q ss_conf             554454--------301487424534896799950687---------4321254121001211443210013666411--
Q gi|254780263|r  218 IEGRGT--------VVTGCIKRGRIKAGSDVEIIGMGG---------KKLKVKCTDVEMFRKKLDEAIAGDNVGLLLR--  278 (392)
Q Consensus       218 i~g~G~--------Vv~GrV~sG~l~~Gd~i~i~p~~~---------~~~~~kv~si~~~~~~v~~a~aGd~v~l~Lk--  278 (392)
T Consensus       220 i~g~Gt~~~~~~G~VvtGtv~~G~ik~GD~vei~Pg~~~~~~~~~~~~pi~t~V~si~~~~~~~~~a~aG~~vai~~~ld  299 (410)
T PRK04000        220 VNKPGTPPEKLKGGVIGGSLIQGVLKVGDEIEIRPGIKVEKGGKTKWEPITTKITSLRAGGEKVEEARPGGLVGVGTKLD  299 (410)
T ss_pred             ECCCCCCCCCCCCCEEEEEEEEEEEECCCEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCEEHHEECCCCEEEECCCCC
T ss_conf             05798655356441788899762784299899944743345665311221269989974783911013676585223345


Q ss_pred             -CCCCCEEECHHEEECCCCCCCC-EEEEEEEEEEECC----CCCCCCCCCCCCEEEEEECCEEEEEEEEECCCHHHHCCC
Q ss_conf             -2454322021177326777630-0016899971056----787555511597899995414777999961895570789
Q gi|254780263|r  279 -GVNRADVPRGRVVCAPGSIQEY-SRFRASVYILTAS----EGGRTTGFMDNYRPQFFMDTADVTGRIILSPGSQAVMPG  352 (392)
Q Consensus       279 -gi~~~di~rGdvl~~~~~~~~~-~~f~A~i~il~~~----~~~~~~~~~~~~~~~~~~~~~~v~~~i~~~~~~~~i~~g  352 (392)
T Consensus       300 ~~i~r~D~~rG~Vl~~pg~l~p~~~~~~~~~~ll~~~~g~~~~~~~~plk~~~~~~~~~gTa~~~g~v~~~~~~------  373 (410)
T PRK04000        300 PALTKADALAGSVAGKPGTLPPVWTSLTIEVHLLERVVGTKEELKVEPIKTGEPLMLNVGTATTVGVVTSAKKD------  373 (410)
T ss_pred             CCCCHHHHHCCCEEECCCCCCCCEEEEEEEEEEEHHHCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEECCCC------
T ss_conf             55335574156554359976874169999999980112653346667765796489998116278999977898------


Q ss_pred             CEEEEEEEECCCEEECCCCEEEE--EECCE--EEEEEEEE
Q ss_conf             76999999778177546984999--98996--99989995
Q gi|254780263|r  353 DRVDLEVELIYPIAMEPNQTFSM--REGGK--TVGAGLIL  388 (392)
Q Consensus       353 ~~~~v~l~l~~pi~~e~~~rfil--Rd~~~--tig~G~I~  388 (392)
T Consensus       374 ---~~~l~L~~Pv~~~~g~Rf~i~rr~~~r~rtIG~G~i~  410 (410)
T PRK04000        374 ---EAEVKLKRPVCAEEGSRVAISRRVGGRWRLIGYGIIK  410 (410)
T ss_pred             ---EEEEEECCCEECCCCCEEEEEEECCCCEEEEEEEEEC
T ss_conf             ---7999969436368899899998359953787258969