HHsearch alignment for GI: 254780263 and conserved domain: PRK10867
>PRK10867 signal recognition particle protein; Provisional.
Probab=97.75 E-value=0.00028 Score=45.64 Aligned_cols=121 Identities=17% Similarity=0.269 Sum_probs=71.9
Q ss_pred CCEEEEEEEECCCCCHHHHHHHHHHHHHH-HHHC----CCCCCCCH-HHHHC--CCEEEEEE-----------------E
Q ss_conf 88279999904689887899999987644-4200----13126868-69862--92063789-----------------9
Q gi|254780263|r 10 KESLGLSTIGHVDHGKTTLTAAITKYYSE-EKKE----YGDIDSAP-EEKLR--GITIATAH-----------------V 64 (392)
Q Consensus 10 k~~~ni~~iGhvd~GKSTL~~~L~~~~~~-~~~~----~~~~D~~~-~E~~r--GiTi~~~~-----------------~ 64 (392)
T Consensus 99 ~p~V-Im~vGLqGsGKTTT~aKLA~~lk~k~~k~vllvaaDt~RpaA~eQL~~la~~~~v~~~~~~~~~dp~~ia~~a~~ 177 (453)
T PRK10867 99 PPAV-VLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPVDIVNAALK 177 (453)
T ss_pred CCEE-EEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHH
T ss_conf 9969-999746888518589999999997389837985588770589999999998519804367889988999999999
Q ss_pred EEECCCEEEEEEECCCC----HHHHHHH--HHHHHCCCCEEEEECCCCCCCC--CHHHHHHHHHHCCCCCEEEEECCCCC
Q ss_conf 98219908999847873----0246779--8774002331452012344332--10677888863187602331002333
Q gi|254780263|r 65 SYETDKRFYSHIDCPGH----ADYVKNM--ITGATQADGAILVCAAEDGPKP--QTREHILLARQIGISSIVVYMNKVDA 136 (392)
Q Consensus 65 ~~~~~~~~i~iiD~PGH----~~f~~~m--i~g~~~~D~ailvVda~~G~~~--QT~eh~~l~~~lgi~~iIv~iNKmD~ 136 (392)
T Consensus 178 ~ak~~~~DvvivDTAGRl~~d~~Lm~El~~i~~~~~P~e~llV~Da~~GQ~a~~~a~---~F~~~~~~~g-vI-lTKlDg 252 (453)
T PRK10867 178 EAKLKFYDVLLVDTAGRLHVDEAMMDEIKQVHASINPVETLFVVDAMTGQDAANTAK---AFNEALPLTG-VV-LTKVDG 252 (453)
T ss_pred HHHHCCCCEEEEECCCCHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHH---HHHHHCCCCE-EE-EECCCC
T ss_conf 999779999999787601210888999999987637871379743223566899999---9998559870-78-750467