HHsearch alignment for GI: 254780263 and conserved domain: PRK13849

>PRK13849 putative crown gall tumor protein VirC1; Provisional.
Probab=96.71  E-value=0.0069  Score=36.97  Aligned_cols=119  Identities=12%  Similarity=0.011  Sum_probs=63.2

Q ss_pred             EEEE-ECCCCCHHHHHHHHHHHHHHHHHCCCCCCC--------CHHH-HHCCCEEEE---EE-----------EEEECCC
Q ss_conf             9999-046898878999999876444200131268--------6869-862920637---89-----------9982199
Q gi|254780263|r   15 LSTI-GHVDHGKTTLTAAITKYYSEEKKEYGDIDS--------APEE-KLRGITIAT---AH-----------VSYETDK   70 (392)
Q Consensus        15 i~~i-Ghvd~GKSTL~~~L~~~~~~~~~~~~~~D~--------~~~E-~~rGiTi~~---~~-----------~~~~~~~   70 (392)
T Consensus         4 i~~~~~KGG~GKtT~a~~la~~~~~~g~~v~~iD~Dpq~s~~~W~e~a~~~~~~~~~~~v~~~~~~~~l~~~~e~~~~~~   83 (231)
T PRK13849          4 LTFCSFKGGAGKTTALMGLCAALASDGKRVALFEADENRPLTRWKENALRSNTWDPACEVYAADELPLLEAAYEDAELQG   83 (231)
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHCC
T ss_conf             99961899876999999999999978995999968998688999987652589887752340565257899998875369


Q ss_pred             EEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHH------HHHCCCCCEEEEECCCCC
Q ss_conf             089998478730246779877400233145201234433210677888------863187602331002333
Q gi|254780263|r   71 RFYSHIDCPGHADYVKNMITGATQADGAILVCAAEDGPKPQTREHILL------ARQIGISSIVVYMNKVDA  136 (392)
Q Consensus        71 ~~i~iiD~PGH~~f~~~mi~g~~~~D~ailvVda~~G~~~QT~eh~~l------~~~lgi~~iIv~iNKmD~  136 (392)
T Consensus        84 ~D~VIIDtpg~~s~~--~~~Ai~~ADLVLIP~qPSp~D~~~a~~tv~~i~~~~~~~~~~ip~~-vlltRv~a  152 (231)
T PRK13849         84 FDYALADTHGGSSEL--NNTIIASSNLLLIPTMLTPLDIDEALSTYRYVIELLLSENLAIPTA-ILRQRVPV  152 (231)
T ss_pred             CCEEEECCCCCCCHH--HHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEE-EEEEECCH
T ss_conf             988998189977589--9999997898997799986679999999999999999728788656-66540504