HHsearch alignment for GI: 254780263 and conserved domain: TIGR02528
>TIGR02528 EutP ethanolamine utilization protein, EutP; InterPro: IPR012381 Members of this family function in ethanolamine and propanediol degradation pathways. Both pathways require coenzyme B12 (adenosylcobalamin, AdoCbl). Bacteria that harbour these pathways can use ethanolamine as a source of carbon and nitrogen, or propanediol as a sole carbon and energy source, respectively. The exact roles of the EutP and PduV proteins in these respective pathways are not yet determined. Members of this family contain P-loop consensus motifs in the N-terminal part, and are distantly related to various GTPases and ATPases, including ATPase components of transport systems. Propanediol degradation is thought to be important for the natural Salmonella populations, since propanediol is produced by the fermentation of the common plant sugars rhamnose and fucose , . More than 10f the Salmonella enterica genome is devoted to the utilisation of propanediol and cobalamin biosynthesis. In vivo expression technology has indicated that propanediol utilisation (pdu) genes may be important for growth in host tissues, and competitive index studies with mice have shown that pdu mutations confer a virulence defect , . The pdu operon is contiguous and co-regulated with the cobalamin (B12) biosynthesis cob operon, indicating that propanediol catabolism may be the primary reason for de novo B12 synthesis in Salmonella , , . Please see IPR003207 from INTERPRO, IPR003208 from INTERPRO, IPR009204 from INTERPRO, IPR009191 from INTERPRO, IPR009192 from INTERPRO for more details on the propanediol utilisation pathway and the pdu operon.; GO: 0005524 ATP binding, 0006576 biogenic amine metabolic process.
Probab=99.08 E-value=2.4e-10 Score=83.26 Aligned_cols=136 Identities=26% Similarity=0.321 Sum_probs=90.3
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEEE-EEECCCEEEEEEECCC----CHHHHHHH
Q ss_conf 999990468988789999998764442001312686869862920637899-9821990899984787----30246779
Q gi|254780263|r 14 GLSTIGHVDHGKTTLTAAITKYYSEEKKEYGDIDSAPEEKLRGITIATAHV-SYETDKRFYSHIDCPG----HADYVKNM 88 (392)
Q Consensus 14 ni~~iGhvd~GKSTL~~~L~~~~~~~~~~~~~~D~~~~E~~rGiTi~~~~~-~~~~~~~~i~iiD~PG----H~~f~~~m 88 (392)
T Consensus 2 r~~f~G~~gCGKTTL~q~L~g~----------------------~~~YKKTQAvE~~~k--~~IDTPGEY~enr~~Y~AL 57 (144)
T TIGR02528 2 RIMFIGSVGCGKTTLTQALQGE----------------------EIKYKKTQAVEYKDK--EAIDTPGEYVENRRYYSAL 57 (144)
T ss_pred EEEEEECCCCCHHHHHHHCCCC----------------------CCCEEEEEEEEECCC--CCCCCCCCCCCCCCHHHHH
T ss_conf 1788715888744354311687----------------------321023344542588--8655985001575237888
Q ss_pred HHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCC-CEEEEECCCCCCCCHHHHHHCCCCCCEEEEEEEEEEEEECCC
Q ss_conf 8774002331452012344332106778888631876-023310023335612221101232100111014532210233
Q gi|254780263|r 89 ITGATQADGAILVCAAEDGPKPQTREHILLARQIGIS-SIVVYMNKVDAVDDDELLDISEYEIRDLLKEHKYSDDTPIIR 167 (392)
Q Consensus 89 i~g~~~~D~ailvVda~~G~~~QT~eh~~l~~~lgi~-~iIv~iNKmD~v~~~~~~~~i~~~i~~~l~~~~~~~~~pii~ 167 (392)
T Consensus 58 ~vtaaDAd~i~lV~~a~~~~~~f~---PgF~~~-f~kK~~IG~vTK~DLA~~d~~i~r~~~----~L~~AG~---~~iF~ 126 (144)
T TIGR02528 58 IVTAADADVIALVQSATDEESRFS---PGFASI-FVKKEVIGIVTKIDLAEADKDIERAKR----LLETAGA---EKIFE 126 (144)
T ss_pred HHHHHCCEEEEEEECCCCCCCCCC---CCCCCC-CCCCCEEEEEEECCCCCCHHHHHHHHH----HHHHCCC---CCCEE
T ss_conf 888721023667735776422378---500023-678863478840378877347999999----9872365---43316
Q ss_pred CEEEEEEECCCCCCCCCCCCCHHHHHH
Q ss_conf 114676411444565212332034431
Q gi|254780263|r 168 GSALCALQGTNKELGEDSIHALMKAVD 194 (392)
Q Consensus 168 ~sa~~g~~~~n~~~~~~~~~~Ll~~i~ 194 (392)
T Consensus 127 ~~~~d----------~~G~~~l~~yL~ 143 (144)
T TIGR02528 127 ISSVD----------EKGIEELVDYLN 143 (144)
T ss_pred ECCCC----------CHHHHHHHHHHC
T ss_conf 50778----------045899999844