HHsearch alignment for GI: 254780263 and conserved domain: cd01850
>cd01850 CDC_Septin CDC/Septin. Septins are a conserved family of GTP-binding proteins associated with diverse processes in dividing and non-dividing cells. They were first discovered in the budding yeast S. cerevisiae as a set of genes (CDC3, CDC10, CDC11 and CDC12) required for normal bud morphology. Septins are also present in metazoan cells, where they are required for cytokinesis in some systems, and implicated in a variety of other processes involving organization of the cell cortex and exocytosis. In humans, 12 septin genes generate dozens of polypeptides, many of which comprise heterooligomeric complexes. Since septin mutants are commonly defective in cytokinesis and formation of the neck formation of the neck filaments/septin rings, septins have been considered to be the primary constituents of the neck filaments. Septins belong to the GTPase superfamily for their conserved GTPase motifs and enzymatic activities.
Probab=98.03 E-value=4.8e-05 Score=50.36 Aligned_cols=140 Identities=19% Similarity=0.288 Sum_probs=80.1
Q ss_pred EEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEEEEEECCC--EEEEEEECCCCHHHHHH--
Q ss_conf 27999990468988789999998764442001312686869862920637899982199--08999847873024677--
Q gi|254780263|r 12 SLGLSTIGHVDHGKTTLTAAITKYYSEEKKEYGDIDSAPEEKLRGITIATAHVSYETDK--RFYSHIDCPGHADYVKN-- 87 (392)
Q Consensus 12 ~~ni~~iGhvd~GKSTL~~~L~~~~~~~~~~~~~~D~~~~E~~rGiTi~~~~~~~~~~~--~~i~iiD~PGH~~f~~~-- 87 (392)
T Consensus 4 ~fnimVvG~sGlGKsTfiNtLf~~~~~~~~--~~~~~~~~~~~~t~~i~~~~~~i~e~g~~l~LtviDTpGfGd~i~n~~ 81 (276)
T cd01850 4 QFNIMVVGESGLGKSTFINTLFNTKLIPSD--YPPDPAEEHIDKTVEIKSSKAEIEENGVKLKLTVIDTPGFGDNINNSD 81 (276)
T ss_pred EEEEEEECCCCCCHHHHHHHHHCCCCCCCC--CCCCCHHHCCCCCCEEEEEEEEEEECCEEEEEEEEECCCCCCCCCHHH
T ss_conf 799999768999889999997478577877--778813205688825899999996399899999997688412236034
Q ss_pred -------------------H---HHHHH----CCCCEEEEECCC-CCCCCCHHHHHHHHHHC-CCCCEEEEECCCCCCCC
Q ss_conf -------------------9---87740----023314520123-44332106778888631-87602331002333561
Q gi|254780263|r 88 -------------------M---ITGAT----QADGAILVCAAE-DGPKPQTREHILLARQI-GISSIVVYMNKVDAVDD 139 (392)
Q Consensus 88 -------------------m---i~g~~----~~D~ailvVda~-~G~~~QT~eh~~l~~~l-gi~~iIv~iNKmD~v~~ 139 (392)
T Consensus 82 ~~~~I~~yI~~qf~~yl~eE~~i~R~~~~~D~RVH~cLYFI~Ptgh~L~~lDi~---~mk~Ls~~vNvIPVIaKADtlT~ 158 (276)
T cd01850 82 CWKPIVDYIDDQFDQYLREESRIKRNPRIPDTRVHACLYFIEPTGHGLKPLDIE---FMKRLSKRVNIIPVIAKADTLTP 158 (276)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHH---HHHHHCCCCCEEEEEECCCCCCH
T ss_conf 099999999999999999985314578887774489999967888888799999---99996275645667851666999
Q ss_pred HHHHHHCCCCCCEEEEEE
Q ss_conf 222110123210011101
Q gi|254780263|r 140 DELLDISEYEIRDLLKEH 157 (392)
Q Consensus 140 ~~~~~~i~~~i~~~l~~~ 157 (392)
T Consensus 159 ~El~~-~K~~I~~~l~~~ 175 (276)
T cd01850 159 EELKE-FKQRIMEDIEEH 175 (276)
T ss_pred HHHHH-HHHHHHHHHHHC
T ss_conf 99999-999999999985