HHsearch alignment for GI: 254780263 and conserved domain: cd01852
>cd01852 AIG1 AIG1 (avrRpt2-induced gene 1). This represents Arabidoposis protein AIG1 that appears to be involved in plant resistance to bacteria. The Arabidopsis disease resistance gene RPS2 is involved in recognition of bacterial pathogens carrying the avirulence gene avrRpt2. AIG1 exhibits RPS2- and avrRpt1-dependent induction early after infection with Pseudomonas syringae carrying avrRpt2. This subfamily also includes IAN-4 protein, which has GTP-binding activity and shares sequence homology with a novel family of putative GTP-binding proteins: the immuno-associated nucleotide (IAN) family. The evolutionary conservation of the IAN family provides a unique example of a plant pathogen response gene conserved in animals. The IAN/IMAP subfamily has been proposed to regulate apoptosis in vertebrates and angiosperm plants, particularly in relation to cancer, diabetes, and infections. The human IAN genes were renamed GIMAP (GTPase of the immunity associated proteins).
Probab=98.00 E-value=2e-05 Score=52.70 Aligned_cols=164 Identities=20% Similarity=0.246 Sum_probs=92.9
Q ss_pred EEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEEEEEECCCEEEEEEECCCCH-------HHH
Q ss_conf 7999990468988789999998764442001312686869862920637899982199089998478730-------246
Q gi|254780263|r 13 LGLSTIGHVDHGKTTLTAAITKYYSEEKKEYGDIDSAPEEKLRGITIATAHVSYETDKRFYSHIDCPGHA-------DYV 85 (392)
Q Consensus 13 ~ni~~iGhvd~GKSTL~~~L~~~~~~~~~~~~~~D~~~~E~~rGiTi~~~~~~~~~~~~~i~iiD~PGH~-------~f~ 85 (392)
T Consensus 1 LrIvLlGktGsGKSstgNtILG~~~F~s~----------~~~~svT~~c~~~~~~~~gr~v~VIDTPg~~dt~~~~~~~~ 70 (196)
T cd01852 1 LRLVLVGKTGAGKSATGNTILGREVFESK----------LSASSVTKTCQKESAVWDGRRVNVIDTPGLFDTSVSPEQLS 70 (196)
T ss_pred CEEEEECCCCCCCHHHHEEECCCCCCCCC----------CCCCCCCEEEEEEEEEECCCEEEEEECCCCCCCCCCHHHHH
T ss_conf 98999789998615340325687666788----------99998755888888998893799996776356558979999
Q ss_pred HHHHHHHH----CCCCEEEEECCCCCCCCCH-HHHH-HHHHHCC---CCCEEEEECCCCCCCCHH---HHHHCCCCCCEE
Q ss_conf 77987740----0233145201234433210-6778-8886318---760233100233356122---211012321001
Q gi|254780263|r 86 KNMITGAT----QADGAILVCAAEDGPKPQT-REHI-LLARQIG---ISSIVVYMNKVDAVDDDE---LLDISEYEIRDL 153 (392)
Q Consensus 86 ~~mi~g~~----~~D~ailvVda~~G~~~QT-~eh~-~l~~~lg---i~~iIv~iNKmD~v~~~~---~~~~i~~~i~~~ 153 (392)
T Consensus 71 ~ei~~~~~l~~pGpHa~LLVi~~~r--fT~ee~~~v~~i~~~FGe~~~~~tivLFT~~D~L~~~sie~~i~~~~~~L~~l 148 (196)
T cd01852 71 KEIVRCLSLSAPGPHAFLLVVPLGR--FTEEEEQAVETLQELFGEKVLDHTIVLFTRGDDLEGGTLEDYLENSCEALKRL 148 (196)
T ss_pred HHHHHHHHHCCCCCEEEEEEEECCC--CCHHHHHHHHHHHHHHCHHHHHHEEEEEECCCCCCCCCHHHHHHHCCHHHHHH
T ss_conf 9999999843899739999997898--89899999999999977786852899996540116886999987346999999
Q ss_pred EEEEEEEEEEECCCCEEEEEEECC-CCCCCCCCCCCHHHHHHCCCC
Q ss_conf 110145322102331146764114-445652123320344310252
Q gi|254780263|r 154 LKEHKYSDDTPIIRGSALCALQGT-NKELGEDSIHALMKAVDTHIP 198 (392)
Q Consensus 154 l~~~~~~~~~pii~~sa~~g~~~~-n~~~~~~~~~~Ll~~i~~~~~ 198 (392)
T Consensus 149 i~kCg~R----------y~~fnN~~~~~~~~~QV~eLl~kIe~mv~ 184 (196)
T cd01852 149 LEKCGGR----------YVAFNNKAKGEEQEQQVKELLAKVESMVK 184 (196)
T ss_pred HHHHCCE----------EEEEECCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 9985998----------99986789975138999999999999999