HHsearch alignment for GI: 254780263 and conserved domain: cd01895

>cd01895 EngA2 EngA2 subfamily. This CD represents the second GTPase domain of EngA and its orthologs, which are composed of two adjacent GTPase domains. Since the sequences of the two domains are more similar to each other than to other GTPases, it is likely that an ancient gene duplication, rather than a fusion of evolutionarily distinct GTPases, gave rise to this family. Although the exact function of these proteins has not been elucidated, studies have revealed that the E. coli EngA homolog, Der, and Neisseria gonorrhoeae EngA are essential for cell viability. A recent report suggests that E. coli Der functions in ribosome assembly and stability.
Probab=99.88  E-value=3e-22  Score=156.97  Aligned_cols=159  Identities=28%  Similarity=0.344  Sum_probs=118.1

Q ss_pred             EEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEEEEEECCCEEEEEEECCCC---------H
Q ss_conf             2799999046898878999999876444200131268686986292063789998219908999847873---------0
Q gi|254780263|r   12 SLGLSTIGHVDHGKTTLTAAITKYYSEEKKEYGDIDSAPEEKLRGITIATAHVSYETDKRFYSHIDCPGH---------A   82 (392)
Q Consensus        12 ~~ni~~iGhvd~GKSTL~~~L~~~~~~~~~~~~~~D~~~~E~~rGiTi~~~~~~~~~~~~~i~iiD~PGH---------~   82 (392)
T Consensus         2 ~~~V~ivG~pN~GKSTL~N~l~g~~~~------~v-----s~~pgtTr~~~~~~~~~~~~~~~~vDtpGi~~~~~~~~~~   70 (174)
T cd01895           2 PIRIAIIGRPNVGKSSLVNALLGEERV------IV-----SDIAGTTRDSIDVPFEYDGKKYTLIDTAGIRRKGKVEEGI   70 (174)
T ss_pred             CCEEEEECCCCCCHHHHHHHHHCCCCE------EE-----CCCCCCEEECCEEEEEECCEEEEEEECCCCCCCCCCCCHH
T ss_conf             989999989999899999998389844------43-----4999915733289999999889998578842134421068


Q ss_pred             HH--HHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCHH-HHHHCCCCCCEEEEEEEE
Q ss_conf             24--677987740023314520123443321067788886318760233100233356122-211012321001110145
Q gi|254780263|r   83 DY--VKNMITGATQADGAILVCAAEDGPKPQTREHILLARQIGISSIVVYMNKVDAVDDDE-LLDISEYEIRDLLKEHKY  159 (392)
Q Consensus        83 ~f--~~~mi~g~~~~D~ailvVda~~G~~~QT~eh~~l~~~lgi~~iIv~iNKmD~v~~~~-~~~~i~~~i~~~l~~~~~  159 (392)
T Consensus        71 e~~~~~~~~~~i~~~dvil~viDa~~~~~~~d~~i~~~l~~~~~p-~iiv~NK~Dli~~~~~~~~~~~~~~~~~~~~~--  147 (174)
T cd01895          71 EKYSVLRTLKAIERADVVLLVIDATEGITEQDLRIAGLILEEGKA-LVIVVNKWDLVEKDSKTMKEFKKEIRRKLPFL--  147 (174)
T ss_pred             HHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCCC-EEEEEECEECCCCCHHHHHHHHHHHHHHHCCC--
T ss_conf             899999999999842865899758989988999999999985998-69998567526764778999999999873416--


Q ss_pred             EEEEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHC
Q ss_conf             322102331146764114445652123320344310
Q gi|254780263|r  160 SDDTPIIRGSALCALQGTNKELGEDSIHALMKAVDT  195 (392)
Q Consensus       160 ~~~~pii~~sa~~g~~~~n~~~~~~~~~~Ll~~i~~  195 (392)
T Consensus       148 -~~~~ii~iSA~~g~----------Gi~~L~~~I~e  172 (174)
T cd01895         148 -DYAPIVFISALTGQ----------GVDKLFDAIDE  172 (174)
T ss_pred             -CCCCEEEEECCCCC----------CHHHHHHHHHH
T ss_conf             -89928999744798----------99999999998