HHsearch alignment for GI: 254780263 and conserved domain: cd03688

>cd03688 eIF2_gamma_II eIF2_gamma_II: this subfamily represents the domain II of the gamma subunit of eukaryotic translation initiation factor 2 (eIF2-gamma) found in Eukaryota and Archaea. eIF2 is a G protein that delivers the methionyl initiator tRNA to the small ribosomal subunit and releases it upon GTP hydrolysis after the recognition of the initiation codon. eIF2 is composed three subunits, alpha, beta and gamma. Subunit gamma shows strongest conservation, and it confers both tRNA binding and GTP/GDP binding.
Probab=98.48  E-value=8.4e-08  Score=67.44  Aligned_cols=91  Identities=25%  Similarity=0.379  Sum_probs=68.7

Q ss_pred             CCCCCCEECCCCCCCCC--------CCCCEEEEEEECCCCCCCEEEEEECC---------CCCCCEEEECCCCCCCCCCC
Q ss_conf             00011000000013554--------45430148742453489679995068---------74321254121001211443
Q gi|254780263|r  204 LDAPFLMHIEGSCGIEG--------RGTVVTGCIKRGRIKAGSDVEIIGMG---------GKKLKVKCTDVEMFRKKLDE  266 (392)
Q Consensus       204 ~~~p~r~~I~~vf~i~g--------~G~Vv~GrV~sG~l~~Gd~i~i~p~~---------~~~~~~kv~si~~~~~~v~~  266 (392)
T Consensus         2 ~~~~P~m~V~RSFDvNkPGt~~~~L~GGViGGSl~~G~lkvgDeIEIrPG~~~~~~~~~~~~Pi~t~I~sl~a~~~~l~~   81 (113)
T cd03688           2 FTSPPRMIVIRSFDVNKPGTEVDDLKGGVAGGSLLQGVLKVGDEIEIRPGIVVKDEGKIKCRPIFTKIVSLKAENNDLQE   81 (113)
T ss_pred             CCCCCEEEEEEEEECCCCCCCHHHCCEEEEEEEEEEEEEECCCEEEECCCEEEEECCEEEEEEEEEEEEEEEECCEEEEE
T ss_conf             98995499998864268999878853008989987879957999997489898739979999899999999929842428


Q ss_pred             CCCCHHHHHHHC---CCCCCEEECHHEEECC
Q ss_conf             210013666411---2454322021177326
Q gi|254780263|r  267 AIAGDNVGLLLR---GVNRADVPRGRVVCAP  294 (392)
Q Consensus       267 a~aGd~v~l~Lk---gi~~~di~rGdvl~~~  294 (392)
T Consensus        82 a~PGGLigvgT~LDPsltk~D~L~G~V~G~~  112 (113)
T cd03688          82 AVPGGLIGVGTKLDPTLTKADRLVGQVVGEP  112 (113)
T ss_pred             ECCCCEEEECCCCCCHHCCCCCCEEEECCCC
T ss_conf             8378578971664813513654247761468