HHsearch alignment for GI: 254780263 and conserved domain: cd04162

>cd04162 Arl9_Arfrp2_like Arl9/Arfrp2-like subfamily. Arl9 (Arf-like 9) was first identified as part of the Human Cancer Genome Project. It maps to chromosome 4q12 and is sometimes referred to as Arfrp2 (Arf-related protein 2). This is a novel subfamily identified in human cancers that is uncharacterized to date.
Probab=98.80  E-value=2.1e-08  Score=71.21  Aligned_cols=110  Identities=20%  Similarity=0.237  Sum_probs=74.4

Q ss_pred             EEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEEEEEECCCEEEEEEECCCCHHHHHHHHHHHHC
Q ss_conf             99990468988789999998764442001312686869862920637899982199089998478730246779877400
Q gi|254780263|r   15 LSTIGHVDHGKTTLTAAITKYYSEEKKEYGDIDSAPEEKLRGITIATAHVSYETDKRFYSHIDCPGHADYVKNMITGATQ   94 (392)
Q Consensus        15 i~~iGhvd~GKSTL~~~L~~~~~~~~~~~~~~D~~~~E~~rGiTi~~~~~~~~~~~~~i~iiD~PGH~~f~~~mi~g~~~   94 (392)
T Consensus         2 IlilGLd~aGKTTil~~l~~~~--------~~~~------~~PT~Gf~~~~i~~~~~~l~~wDlgGq~~~R~~W~~Y~~~   67 (164)
T cd04162           2 ILVLGLDGAGKTSLLHSLSSER--------SLES------VVPTTGFNSVAIPTQDAIMELLEIGGSQNLRKYWKRYLSG   67 (164)
T ss_pred             EEEECCCCCCHHHHHHHHHCCC--------CCCC------CCCCCCCCEEEEEECCEEEEEEECCCHHHHHHHHHHHHHC
T ss_conf             9999679998999999981699--------8765------3563277469999899999998537528886569987117


Q ss_pred             CCCEEEEECCCC-CCCCCHHHHHHH--HHHCCCCCEEEEECCCCCCCC
Q ss_conf             233145201234-433210677888--863187602331002333561
Q gi|254780263|r   95 ADGAILVCAAED-GPKPQTREHILL--ARQIGISSIVVYMNKVDAVDD  139 (392)
Q Consensus        95 ~D~ailvVda~~-G~~~QT~eh~~l--~~~lgi~~iIv~iNKmD~v~~  139 (392)
T Consensus        68 ~~gIIfVVDssD~~rl~eak~~L~~ll~~~~~~P-lLIlaNKqDl~~a  114 (164)
T cd04162          68 SQGLIFVVDSADSERLPLARQELHQLLQHPPDLP-LVVLANKQDLPAA  114 (164)
T ss_pred             CCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCE-EEEEEECCCCCCC
T ss_conf             7589999956888899999999999970879986-9999863243369