HHsearch alignment for GI: 254780263 and conserved domain: pfam00025
>pfam00025 Arf ADP-ribosylation factor family. Pfam combines a number of different Prosite families together
Probab=99.51 E-value=1.1e-13 Score=103.81 Aligned_cols=145 Identities=19% Similarity=0.157 Sum_probs=90.3
Q ss_pred CCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEEEEEECCCEEEEEEECCCCHHHHHHH
Q ss_conf 38827999990468988789999998764442001312686869862920637899982199089998478730246779
Q gi|254780263|r 9 NKESLGLSTIGHVDHGKTTLTAAITKYYSEEKKEYGDIDSAPEEKLRGITIATAHVSYETDKRFYSHIDCPGHADYVKNM 88 (392)
Q Consensus 9 ~k~~~ni~~iGhvd~GKSTL~~~L~~~~~~~~~~~~~~D~~~~E~~rGiTi~~~~~~~~~~~~~i~iiD~PGH~~f~~~m 88 (392)
T Consensus 11 ~~k~~Ki~llG~~~vGKTsll~~~~~~---------~~~~~------~pTig~~~~~v~~~~~~~~iwDt~Gqe~~~~~~ 75 (174)
T pfam00025 11 LNKEMRILILGLDNAGKTTILYKLKLG---------EIVTT------IPTIGFNVETVTYKNVKFTVWDVGGQESLRPLW 75 (174)
T ss_pred CCCEEEEEEECCCCCCHHHHHHHHHCC---------CCCCC------CCCCCCEEEEEEECCEEEEEEECCCCCCCCHHH
T ss_conf 896669999999999889999999549---------98874------474682389999899999998279870232679
Q ss_pred HHHHHCCCCEEEEECCCCC-CCCCHHHHHHH-HH---HCCCCCEEEEECCCCCCCCHHHHHHCCCCCCEEEEEEEE-EEE
Q ss_conf 8774002331452012344-33210677888-86---318760233100233356122211012321001110145-322
Q gi|254780263|r 89 ITGATQADGAILVCAAEDG-PKPQTREHILL-AR---QIGISSIVVYMNKVDAVDDDELLDISEYEIRDLLKEHKY-SDD 162 (392)
Q Consensus 89 i~g~~~~D~ailvVda~~G-~~~QT~eh~~l-~~---~lgi~~iIv~iNKmD~v~~~~~~~~i~~~i~~~l~~~~~-~~~ 162 (392)
T Consensus 76 ~~y~~~a~~ii~V~D~t~~~s~~~~~~~l~~~l~~~~~~~~p-iliv~NK~DL~~~~~~-~----ei~~~~~~~~~~~~~ 149 (174)
T pfam00025 76 RNYFPNTDAVIFVVDSADRDRIEEAKEELHALLNEEELADAP-LLILANKQDLPGAMSE-A----EIRELLGLHELKSRP 149 (174)
T ss_pred HHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCE-EEEEEECCCCCCCCCH-H----HHHHHHHHHHCCCCC
T ss_conf 988417826899986786787999999999987542358970-8998725667678999-9----999999786441799
Q ss_pred EECCCCEEEEEE
Q ss_conf 102331146764
Q gi|254780263|r 163 TPIIRGSALCAL 174 (392)
Q Consensus 163 ~pii~~sa~~g~ 174 (392)
T Consensus 150 ~~~~~~SAktG~ 161 (174)
T pfam00025 150 WEIQGCSAVTGE 161 (174)
T ss_pred CEEEEEECCCCC
T ss_conf 689999886795