RPSBLAST alignment for GI: 254780263 and conserved domain: cd04167

>gnl|CDD|133367 cd04167, Snu114p, Snu114p subfamily. Snu114p is one of several proteins that make up the U5 small nuclear ribonucleoprotein (snRNP) particle. U5 is a component of the spliceosome, which catalyzes the splicing of pre-mRNA to remove introns. Snu114p is homologous to EF-2, but typically contains an additional N-terminal domain not found in Ef-2. This protein is part of the GTP translation factor family and the Ras superfamily, characterized by five G-box motifs. Length = 213
 Score = 63.8 bits (156), Expect = 8e-11
 Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 15/131 (11%)

Query: 18  IGHVDHGKTTLTAAITKYYSEEKKEYGDIDSAPE--------EKLRGITIATAHVSY-ET 68
            GH+ HGKT+L   +    + +    G     P         E+ RGI+I ++ +S    
Sbjct: 6   AGHLHHGKTSLLDMLI-EQTHDLTPSGKDGWKPLRYTDIRKDEQERGISIKSSPISLVLP 64

Query: 69  DKRFYSH----IDCPGHADYVKNMITGATQADGAILVCAAEDGPKPQTREHILLARQIGI 124
           D +  S+    ID PGH +++  +      +DG +LV    +G    T   I  A   G+
Sbjct: 65  DSKGKSYLFNIIDTPGHVNFMDEVAAALRLSDGVVLVVDVVEGVTSNTERLIRHAILEGL 124

Query: 125 SSIVVYMNKVD 135
             IV+ +NK+D
Sbjct: 125 -PIVLVINKID 134