HHsearch alignment for GI: 254780264 and conserved domain: COG1084
>COG1084 Predicted GTPase [General function prediction only].
Probab=98.71 E-value=2.1e-07 Score=66.31 Aligned_cols=121 Identities=21% Similarity=0.323 Sum_probs=78.9
Q ss_pred CCCCHH-HEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEECCCCEECCCHHHHHHHCCCEEEE-EEEEEECCCCCCCE
Q ss_conf 656710-2527999868788977899999998087321422017956137808898708537640-79999607778713
Q gi|254780264|r 3 RKCKIE-DSRNFGIMAHIDAGKTTTTERILYYAGKSHKIGEVHDGSATMDWMEQEQERGITITSA-STTVFWPGRDGGQK 80 (701)
Q Consensus 3 ~~~~~e-~iRNv~iiaHvd~GKTTL~d~LL~~~g~i~~~g~v~~g~~~~D~~~~E~eRgITi~ss-~~sl~~~~~~~~~~ 80 (701)
T Consensus 160 ~LP~Idp~~pTivVaG~PNVGKSSlv~~lT---~Akp---EvA~---Y----------PFTTK~i~vGhfe~-----~~~ 215 (346)
T COG1084 160 KLPAIDPDLPTIVVAGYPNVGKSSLVRKLT---TAKP---EVAP---Y----------PFTTKGIHVGHFER-----GYL 215 (346)
T ss_pred CCCCCCCCCCEEEEECCCCCCHHHHHHHHH---CCCC---CCCC---C----------CCCCCCEEEEEEEC-----CCC
T ss_conf 088779999738985699875899998875---4897---6678---8----------85336546765504-----870
Q ss_pred EEEEEECCCCCCCHH--------HHHHHHHHHCEEEE-EEECCC----CCCHHHHHHHHHHH-HCCCCEEEEECCCCCCC
Q ss_conf 899981798755289--------99999986045699-995588----88834799999998-73997899981767658
Q gi|254780264|r 81 KLTIIDTPGHVDFTM--------EVERSIRVTDGAIA-LLDSNA----GVEPQTETVWRQAD-KYSVPRVIFCNKMDKMG 146 (701)
Q Consensus 81 ~iNlIDTPGH~DF~~--------Ev~~aL~~~Dgail-vVDa~e----Gv~~qT~~vlr~~~-~~~lp~ilvINKiDr~~ 146 (701)
T Consensus 216 R~QvIDTPGlLDRPl~ErN~IE~qAi~AL~hl~~~IlF~~D~Se~cgy~lE~Q-~~L~~eIk~~f~~p~v~V~nK~D~~~ 294 (346)
T COG1084 216 RIQVIDTPGLLDRPLEERNEIERQAILALRHLAGVILFLFDPSETCGYSLEEQ-ISLLEEIKELFKAPIVVVINKIDIAD 294 (346)
T ss_pred EEEEECCCCCCCCCHHHHCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHH-HHHHHHHHHHCCCCEEEEEECCCCCC
T ss_conf 58984288645788577368999999999974285899976850028999999-99999999853887699974101246
Q ss_pred CC
Q ss_conf 75
Q gi|254780264|r 147 AD 148 (701)
Q Consensus 147 ~d 148 (701)
T Consensus 295 ~e 296 (346)
T COG1084 295 EE 296 (346)
T ss_pred HH
T ss_conf 66