HHsearch alignment for GI: 254780264 and conserved domain: COG1160

Probab=99.16  E-value=5.3e-10  Score=82.94  Aligned_cols=116  Identities=21%  Similarity=0.245  Sum_probs=89.1

Q ss_pred             HEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEECCCCEECCCHHHHHHHCCCEEEEEEEEEECCCCCCCEEEEEEECC
Q ss_conf             25279998687889778999999980873214220179561378088987085376407999960777871389998179
Q gi|254780264|r    9 DSRNFGIMAHIDAGKTTTTERILYYAGKSHKIGEVHDGSATMDWMEQEQERGITITSASTTVFWPGRDGGQKKLTIIDTP   88 (701)
Q Consensus         9 ~iRNv~iiaHvd~GKTTL~d~LL~~~g~i~~~g~v~~g~~~~D~~~~E~eRgITi~ss~~sl~~~~~~~~~~~iNlIDTP   88 (701)
T Consensus       177 ~~ikiaiiGrPNvGKSsLiN~ilgeeR~Iv--~~-~a--------------GTTRD~I~~~~e~~-----~~~~~liDTA  234 (444)
T COG1160         177 DPIKIAIIGRPNVGKSSLINAILGEERVIV--SD-IA--------------GTTRDSIDIEFERD-----GRKYVLIDTA  234 (444)
T ss_pred             CCEEEEEEECCCCCCHHHHHHHCCCCEEEE--CC-CC--------------CCCCCCEEEEEEEC-----CEEEEEEECC
T ss_conf             750899992787870588877506825984--59-99--------------86220331258998-----8189999877


Q ss_pred             CC----------CCCH-HHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCC
Q ss_conf             87----------5528-9999999860456999955888883479999999873997899981767658
Q gi|254780264|r   89 GH----------VDFT-MEVERSIRVTDGAIALLDSNAGVEPQTETVWRQADKYSVPRVIFCNKMDKMG  146 (701)
Q Consensus        89 GH----------~DF~-~Ev~~aL~~~DgailvVDa~eGv~~qT~~vlr~~~~~~lp~ilvINKiDr~~  146 (701)
T Consensus       235 GiRrk~ki~e~~E~~Sv~rt~~aI~~a~vvllviDa~~~~~~qD~~ia~~i~~~g~~~vIvvNKWDl~~  303 (444)
T COG1160         235 GIRRKGKITESVEKYSVARTLKAIERADVVLLVIDATEGISEQDLRIAGLIEEAGRGIVIVVNKWDLVE  303 (444)
T ss_pred             CCCCCCCCCCCEEEEEEHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCC
T ss_conf             877466412426887505467678656889999988878368899999999975897499997532578