HHsearch alignment for GI: 254780264 and conserved domain: PRK09518

Probab=99.63  E-value=1.8e-14  Score=111.66  Aligned_cols=119  Identities=24%  Similarity=0.365  Sum_probs=88.4

Q ss_pred             CCHHHEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEECCCCEECCCHHHHHHHCCCEEEEEEEEEECCCCCCCEEEEE
Q ss_conf             67102527999868788977899999998087321422017956137808898708537640799996077787138999
Q gi|254780264|r    5 CKIEDSRNFGIMAHIDAGKTTTTERILYYAGKSHKIGEVHDGSATMDWMEQEQERGITITSASTTVFWPGRDGGQKKLTI   84 (701)
Q Consensus         5 ~~~e~iRNv~iiaHvd~GKTTL~d~LL~~~g~i~~~g~v~~g~~~~D~~~~E~eRgITi~ss~~sl~~~~~~~~~~~iNl   84 (701)
T Consensus       274 ~~~~~~p~VAIVGRPNVGKSTLFNRL~g~r~AI-----V~d------~p------GvTRDR~~~~~~~~-----~~~F~l  331 (714)
T PRK09518        274 AGPEPVGTVAIVGRPNVGKSTLVNRILGRREAV-----VED------TP------GVTRDRVSYDAEWA-----GRDFKL  331 (714)
T ss_pred             CCCCCCCEEEEECCCCCCHHHHHHHHHCCCEEE-----ECC------CC------CCCCCCCEEEEEEC-----CEEEEE
T ss_conf             677888879998999876899998862884168-----469------89------98837555799999-----916999


Q ss_pred             EECCCCC----CC----HHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC
Q ss_conf             8179875----52----8999999986045699995588888347999999987399789998176765
Q gi|254780264|r   85 IDTPGHV----DF----TMEVERSIRVTDGAIALLDSNAGVEPQTETVWRQADKYSVPRVIFCNKMDKM  145 (701)
Q Consensus        85 IDTPGH~----DF----~~Ev~~aL~~~DgailvVDa~eGv~~qT~~vlr~~~~~~lp~ilvINKiDr~  145 (701)
T Consensus       332 vDTGG~~~~~~~~~~~I~~Q~~~Ai~eADlIlFVVD~~~Glt~~D~~ia~~LRk~~KpvilvvNK~D~~  400 (714)
T PRK09518        332 VDTGGWEADAEGIEAAIASQAEIAMTLADAIVFVVDGQVGMTSTDEVIARMLQRAGKPVVLVANKIDDQ  400 (714)
T ss_pred             EECCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCC
T ss_conf             979999988326999999999999996899999996897989789999999985699889999897887