HHsearch alignment for GI: 254780264 and conserved domain: PRK11537
>PRK11537 putative GTP-binding protein YjiA; Provisional.
Probab=96.65 E-value=0.019 Score=34.40 Aligned_cols=128 Identities=24% Similarity=0.216 Sum_probs=63.3
Q ss_pred EEEECCCCCCHHHHHHHHHHHCCCCC------CCCEECCCCEECCCHHHHH--HHCCCEEEEEEEEEECCC---------
Q ss_conf 99986878897789999999808732------1422017956137808898--708537640799996077---------
Q gi|254780264|r 13 FGIMAHIDAGKTTTTERILYYAGKSH------KIGEVHDGSATMDWMEQEQ--ERGITITSASTTVFWPGR--------- 75 (701)
Q Consensus 13 v~iiaHvd~GKTTL~d~LL~~~g~i~------~~g~v~~g~~~~D~~~~E~--eRgITi~ss~~sl~~~~~--------- 75 (701)
T Consensus 7 tiltGFLGaGKTTlL~~lL~~~~~~riaVivNEfGev~-----iD~~li~~~~~~v~eL~nGCiCCs~~~dl~~~l~~l~ 81 (317)
T PRK11537 7 TLLTGFLGAGKTTLLRHILNEQHGYKIAVIENEFGEVS-----VDDQLIGDRATQIKTLTNGCICCSRSNELEDALLDLL 81 (317)
T ss_pred EEEEECCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCC-----CHHHHHHCCCCCEEEECCCCEEEEECCHHHHHHHHHH
T ss_conf 99830888899999999972778997899983761453-----3298873565326884477368730522899999999
Q ss_pred ---CCC--CEEEEEEECCCCCCCHHHHHH--------HHHHHCEEEEEEECCCCCCHHH-HHHHHHHHHCCCCEEEEECC
Q ss_conf ---787--138999817987552899999--------9986045699995588888347-99999998739978999817
Q gi|254780264|r 76 ---DGG--QKKLTIIDTPGHVDFTMEVER--------SIRVTDGAIALLDSNAGVEPQT-ETVWRQADKYSVPRVIFCNK 141 (701)
Q Consensus 76 ---~~~--~~~iNlIDTPGH~DF~~Ev~~--------aL~~~DgailvVDa~eGv~~qT-~~vlr~~~~~~lp~ilvINK 141 (701)
T Consensus 82 ~~~~~~~~~~D~IiIEtsGlAdP~~I~~~~~~~~~l~~~~~Ld~vVtvVDa~~~~~~l~~~~~~--~~Qi~~AD~illnK 159 (317)
T PRK11537 82 DNLDRGNIQFDRLVIECTGMADPGPIIQTFFSHEVLCQRYLLDGVIALVDAVHADEQMNQFTIA--QSQVGYADRILLTK 159 (317)
T ss_pred HHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHEECCCEEEEEEHHHHHHHHHCCHHH--HHHHHHCCEEEEEC
T ss_conf 8664357775479996257788399999986125656532036559998665557665303466--76663186899742
Q ss_pred CCCCCC
Q ss_conf 676587
Q gi|254780264|r 142 MDKMGA 147 (701)
Q Consensus 142 iDr~~~ 147 (701)
T Consensus 160 ~Dlv~~ 165 (317)
T PRK11537 160 TDVAGE 165 (317)
T ss_pred CCCCCH
T ss_conf 002365