HHsearch alignment for GI: 254780264 and conserved domain: TIGR01394

>TIGR01394 TypA_BipA GTP-binding protein TypA; InterPro: IPR006298 This bacterial (and Arabidopsis) protein, termed TypA or BipA, is a GTP-binding protein. It is phosphorylated on a tyrosine residue under some cellular conditions. Mutants show altered regulation of some pathways, but the precise function is unknown.; GO: 0005525 GTP binding, 0005622 intracellular.
Probab=100.00  E-value=0  Score=777.02  Aligned_cols=469  Identities=31%  Similarity=0.519  Sum_probs=410.7

Q ss_pred             EEEEEEECCCCCCHHHHHHHHHHHCC-CCCC-CCEECCCCEECCCHHHHHHHCCCEEEEEEEEEECCCCCCCEEEEEEEC
Q ss_conf             52799986878897789999999808-7321-422017956137808898708537640799996077787138999817
Q gi|254780264|r   10 SRNFGIMAHIDAGKTTTTERILYYAG-KSHK-IGEVHDGSATMDWMEQEQERGITITSASTTVFWPGRDGGQKKLTIIDT   87 (701)
Q Consensus        10 iRNv~iiaHvd~GKTTL~d~LL~~~g-~i~~-~g~v~~g~~~~D~~~~E~eRgITi~ss~~sl~~~~~~~~~~~iNlIDT   87 (701)
T Consensus         1 iRNIAIIAHVDHGKTTLVD~LL~Qsgf~f~~~~~~~~E--R~MDSNDLErERGITILaKNTav~y~g~dG-~~~INIvDT   77 (609)
T TIGR01394         1 IRNIAIIAHVDHGKTTLVDALLKQSGFTFRADNEAVAE--RVMDSNDLERERGITILAKNTAVRYNGKDG-VTKINIVDT   77 (609)
T ss_pred             CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEE--EEECCCCCCHHCCCCCCCEEEEEEECCCCC-EEEEEEEEC
T ss_conf             97189998806994368988888765886415883213--540676521001552013003662528897-189977816


Q ss_pred             CCCCCCHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCC---CCCC
Q ss_conf             9875528999999986045699995588888347999999987399789998176765875555666411110---2683
Q gi|254780264|r   88 PGHVDFTMEVERSIRVTDGAIALLDSNAGVEPQTETVWRQADKYSVPRVIFCNKMDKMGADFYRSVEMISSRL---GANP  164 (701)
Q Consensus        88 PGH~DF~~Ev~~aL~~~DgailvVDa~eGv~~qT~~vlr~~~~~~lp~ilvINKiDr~~~d~~~~l~~i~~~l---~~~~  164 (701)
T Consensus        78 PGHADFGGEVERvL~MVDGvlLlVDA~EGPMPQTrFVL~KAL~~gLkPIVViNKiDrp~ARP~eV~d~vFDLF~~LgA~d  157 (609)
T TIGR01394        78 PGHADFGGEVERVLGMVDGVLLLVDASEGPMPQTRFVLKKALELGLKPIVVINKIDRPSARPDEVVDEVFDLFIELGADD  157 (609)
T ss_pred             CCCCCCCCEEEEECEEEEEEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCC
T ss_conf             89887886588733024058999857888988534789999956893699971347887883788757878888538880


Q ss_pred             CEECCCCCCCCCCCEEEEEHHHHHHCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
Q ss_conf             30002345556653024422344311452226985138740043178899999988630023457899986327789988
Q gi|254780264|r  165 LVIQLPVGSESNFQGVIDLVEMKALLWKNEDLGSSWDVVEIPEDMKDSANSYRDKMIESIVELDDSAMDSYLQGESFSSD  244 (701)
Q Consensus       165 ~~~~~p~~~~~~~~g~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lle~i~~~dd~~~~~~l~~~~~~~~  244 (701)
T Consensus       158 eQLDFP~vYASa~~G~A~l~~--------------------~~d-----------------------------g~~----  184 (609)
T TIGR01394       158 EQLDFPIVYASARAGWASLDK--------------------DKD-----------------------------GLD----  184 (609)
T ss_pred             CCCCHHHHHHHHCCCCCCCCC--------------------CCC-----------------------------CCC----
T ss_conf             010125676652367201446--------------------657-----------------------------788----


Q ss_pred             HHHHHHCCEEECCEEEECCCCCEECCCCHHHHHHHHHHHCCCHHHEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCC
Q ss_conf             98730000031010032343100012210248898987178621300012222456752101123456542010332116
Q gi|254780264|r  245 RIRSLIRLGTISVKFFPVLCGSSFKNKGVQPLLDAVVDYLPSPLDVRAIKGVDVKSNSEIDVSAVDSSPLSMLAFKVMAD  324 (701)
Q Consensus       245 ~l~~~l~~~~~~~~~~pv~~gsa~~~~Gv~~LLd~i~~~lPsP~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~v~K~~~d  324 (701)
T Consensus       185 -----------------------~~~~~m~PLFd~I~~hvPaP-------------------~~~~d~PlQmlvt~ldy~  222 (609)
T TIGR01394       185 -----------------------DDSEDMAPLFDAILRHVPAP-------------------KGDLDEPLQMLVTNLDYD  222 (609)
T ss_pred             -----------------------CCHHHHHHHHHHHHHCCCCC-------------------CCCCCCCHHHEEEECCCC
T ss_conf             -----------------------72201789998986406888-------------------988876242100011014


Q ss_pred             CCCCCEEHHHHHCCCCCCCCEEEEECCC-C---CCEEHHHHHHHCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCC
Q ss_conf             5467100001101334568368983265-5---41110453210474454200356732641387444321101277884
Q gi|254780264|r  325 SFVGSLTFCRIYSGKISKGDSLLNTVKG-K---KERVGRMLQMHSNSREDIDEAYCGDIIALAGLKETTTGDTLCDPSRP  400 (701)
Q Consensus       325 ~~~G~~a~~RV~SGtL~~gd~i~~~~~~-~---~~kV~~l~~~~g~~~~~v~~a~aGdIv~I~Gl~~~~~gdTl~~~~~~  400 (701)
T Consensus       223 ~y~GRI~~GRv~~G~vk~Gq~V~~~~~d~g~~~~~ri~~L~~f~GL~R~~~d~A~AGDIvAvaG~~~~~IGeTiad~~~~  302 (609)
T TIGR01394       223 EYLGRIAIGRVHRGTVKKGQQVALMKRDDGTIENGRISKLLGFEGLERVEIDEAGAGDIVAVAGLEDINIGETIADPEAP  302 (609)
T ss_pred             CCCCEEEEEEEEECEECCCCEEEEEECCCCEEEEEEEEEEEECCCCEEEECCCCCCCCEEEEECCCCCCCCCEECCCCCC
T ss_conf             67766999987505654686479872469689777764542015711000455798778999077988735211333346


Q ss_pred             CCCCCCCCCCCEEEEEEEE----CCCCC-CHH-----HHHHHHHHHCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHHH
Q ss_conf             1015663665213577761----56432-202-----5788885410274201445045754687606647899999998
Q gi|254780264|r  401 IVLERMDFPEPVIQIAIEP----KSKGD-QER-----MSLALSRLVAEDPSLRVSMDPNSGQTNLSGMGELHLEIIVDRM  470 (701)
Q Consensus       401 ~~~~~~~~~~Pvv~vaIep----~~~~d-~~k-----L~~~L~~L~~~Dp~l~v~~~~etGE~il~g~GElhLev~l~~L  470 (701)
T Consensus       303 ~ALP~~~vDEPT~sMtF~vN~SPlAG~EVGk~VTSR~i~dRL~rEL~~NvALrVe~t~~~D~f~VsGRGELhLsILiEtM  382 (609)
T TIGR01394       303 EALPLITVDEPTLSMTFSVNDSPLAGKEVGKFVTSRQIRDRLERELETNVALRVEDTESADKFEVSGRGELHLSILIETM  382 (609)
T ss_pred             CCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEECCCCHHHHHHHHHHCCCEEEEECCCCCCCEEEECCEEEHHHHHHHCC
T ss_conf             78871125888128998752887655325730324415789999863171456403898873487201113023454203


Q ss_pred             HHHCCCCCEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCCCEEEECCEEECCEEHHHHHHHHHHHH
Q ss_conf             74111332010541011014442103554321158987530278999702888864798120026700243332567789
Q gi|254780264|r  471 LREFKVDANVGAPYVSYRESVTKSCVHDYIHKKQSGGAGQFAKVKIAFEPNPDGDDFVFESKIVGGAIPKEYIPGVRKGI  550 (701)
Q Consensus       471 ~~~f~iei~vs~P~V~yrEti~~~~~~~~~~~~~~~~~~~~~~v~~~~eP~~~g~~~~f~~~~~~~~~~~~~~~~v~~g~  550 (701)
T Consensus       383 RRE-GfEl~Vg~P~Vi~k~-~dG---------------------------------------------------------  403 (609)
T TIGR01394       383 RRE-GFELQVGRPQVIYKE-IDG---------------------------------------------------------  403 (609)
T ss_pred             CCC-CEEEEECCCEEEEEE-ECC---------------------------------------------------------
T ss_conf             444-414753597789984-588---------------------------------------------------------


Q ss_pred             HHHHHHCCCCCCEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEECHHHHHHHHHHHHH
Q ss_conf             99997188225503312899995111687676033799999999999984898898017899998385774579999972
Q gi|254780264|r  551 ESMLSSGPLAGFPMLGMKVTLLDGDYHDVDSSVLAFEIAARACFREAASKMGVQLLEPLMKVEVTVPAEYVGDVIGDLSS  630 (701)
Q Consensus       551 ~~a~~~GpL~~epi~gv~v~l~d~~~~~~~s~~~~~~~a~~~a~~~a~~~a~p~LlEPi~~~eI~~p~~~~g~v~~~L~~  630 (701)
T Consensus       404 -----------------------------------------------------~k~EP~E~~~IDVPEe~~G~V~e~Lg~  430 (609)
T TIGR01394       404 -----------------------------------------------------KKLEPIEELTIDVPEEHVGAVIEKLGK  430 (609)
T ss_pred             -----------------------------------------------------EEECCEEEEEEECCCCCCCHHHHHHCC
T ss_conf             -----------------------------------------------------531875699980285335466653147


Q ss_pred             CCEEEEEEECC-C-CEEEEEEEEEHHHHCCHHHHHHHHHCCEEEEEEEECCEEECC-HHHH
Q ss_conf             77079745358-9-839999996043733847887863086379899962904088-5599
Q gi|254780264|r  631 RRGQIQGQENR-S-VYVVIDAHVPLSCMFKYVDSLRSMSQGRGQYTMIFDHYAPVP-AHVS  688 (701)
Q Consensus       631 Rrg~i~~~~~~-~-~~~~i~a~iP~~e~~gf~~~LR~~T~G~a~~~~~F~~~~~vp-~~~~  688 (701)
T Consensus       431 RKgEm~~M~~~g~EG~tRl~F~~PsRGLIGfr~~FlT~TrG~Gimn~~F~~Y~P~~pG~i~  491 (609)
T TIGR01394       431 RKGEMKDMEPSGNEGRTRLEFVIPSRGLIGFRTEFLTDTRGTGIMNHVFDEYEPWKPGEIE  491 (609)
T ss_pred             CCEEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf             8347772567699646999998166400122024544102131120121025788876877