HHsearch alignment for GI: 254780264 and conserved domain: cd01850
>cd01850 CDC_Septin CDC/Septin. Septins are a conserved family of GTP-binding proteins associated with diverse processes in dividing and non-dividing cells. They were first discovered in the budding yeast S. cerevisiae as a set of genes (CDC3, CDC10, CDC11 and CDC12) required for normal bud morphology. Septins are also present in metazoan cells, where they are required for cytokinesis in some systems, and implicated in a variety of other processes involving organization of the cell cortex and exocytosis. In humans, 12 septin genes generate dozens of polypeptides, many of which comprise heterooligomeric complexes. Since septin mutants are commonly defective in cytokinesis and formation of the neck formation of the neck filaments/septin rings, septins have been considered to be the primary constituents of the neck filaments. Septins belong to the GTPase superfamily for their conserved GTPase motifs and enzymatic activities.
Probab=97.91 E-value=0.00052 Score=44.47 Aligned_cols=123 Identities=19% Similarity=0.228 Sum_probs=63.6
Q ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCCCCCEECCCCEECCCHHHHHHHCCCEEEEEEEEEECCCCCCCEEEEEEECCCCC
Q ss_conf 79998687889778999999980873214220179561378088987085376407999960777871389998179875
Q gi|254780264|r 12 NFGIMAHIDAGKTTTTERILYYAGKSHKIGEVHDGSATMDWMEQEQERGITITSASTTVFWPGRDGGQKKLTIIDTPGHV 91 (701)
Q Consensus 12 Nv~iiaHvd~GKTTL~d~LL~~~g~i~~~g~v~~g~~~~D~~~~E~eRgITi~ss~~sl~~~~~~~~~~~iNlIDTPGH~ 91 (701)
T Consensus 6 nimVvG~sGlGKsTfiNtLf~~-~~~~~-------~~~~~~~~~~~~~t~~i~~~~~~i~e---~g~~l~LtviDTpGfG 74 (276)
T cd01850 6 NIMVVGESGLGKSTFINTLFNT-KLIPS-------DYPPDPAEEHIDKTVEIKSSKAEIEE---NGVKLKLTVIDTPGFG 74 (276)
T ss_pred EEEEECCCCCCHHHHHHHHHCC-CCCCC-------CCCCCCHHHCCCCCCEEEEEEEEEEE---CCEEEEEEEEECCCCC
T ss_conf 9999768999889999997478-57787-------77788132056888258999999963---9989999999768841
Q ss_pred CCHHHHHHHHHH----------------------------HCEEEEEEEC-CCCCCHHHHHHHHHHHHCCCCEEEEECCC
Q ss_conf 528999999986----------------------------0456999955-88888347999999987399789998176
Q gi|254780264|r 92 DFTMEVERSIRV----------------------------TDGAIALLDS-NAGVEPQTETVWRQADKYSVPRVIFCNKM 142 (701)
Q Consensus 92 DF~~Ev~~aL~~----------------------------~DgailvVDa-~eGv~~qT~~vlr~~~~~~lp~ilvINKi 142 (701)
T Consensus 75 d~i~n~~~~~~I~~yI~~qf~~yl~eE~~i~R~~~~~D~RVH~cLYFI~Ptgh~L~~lDi~~mk~-Ls~~vNvIPVIaKA 153 (276)
T cd01850 75 DNINNSDCWKPIVDYIDDQFDQYLREESRIKRNPRIPDTRVHACLYFIEPTGHGLKPLDIEFMKR-LSKRVNIIPVIAKA 153 (276)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHH-HCCCCCEEEEEECC
T ss_conf 22360340999999999999999999853145788877744899999678888887999999999-62756456678516
Q ss_pred CCCC
Q ss_conf 7658
Q gi|254780264|r 143 DKMG 146 (701)
Q Consensus 143 Dr~~ 146 (701)
T Consensus 154 DtlT 157 (276)
T cd01850 154 DTLT 157 (276)
T ss_pred CCCC
T ss_conf 6699