HHsearch alignment for GI: 254780264 and conserved domain: cd01868
>cd01868 Rab11_like Rab11-like. Rab11a, Rab11b, and Rab25 are closely related, evolutionary conserved Rab proteins that are differentially expressed. Rab11a is ubiquitously synthesized, Rab11b is enriched in brain and heart and Rab25 is only found in epithelia. Rab11/25 proteins seem to regulate recycling pathways from endosomes to the plasma membrane and to the trans-Golgi network. Furthermore, Rab11a is thought to function in the histamine-induced fusion of tubulovesicles containing H+, K+ ATPase with the plasma membrane in gastric parietal cells and in insulin-stimulated insertion of GLUT4 in the plasma membrane of cardiomyocytes. Overexpression of Rab25 has recently been observed in ovarian cancer and breast cancer, and has been correlated with worsened outcomes in both diseases. In addition, Rab25 overexpression has also been observed in prostate cancer, transitional cell carcinoma of the bladder, and invasive breast tumor cells. GTPase activating proteins (GAPs) interact with GTP
Probab=98.66 E-value=4.2e-07 Score=64.36 Aligned_cols=110 Identities=21% Similarity=0.237 Sum_probs=72.9
Q ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCCCCCEECCCCEECCCHHHHHHHCCCEEE--EEEEEEECCCCCCCEEEEEEECCC
Q ss_conf 799986878897789999999808732142201795613780889870853764--079999607778713899981798
Q gi|254780264|r 12 NFGIMAHIDAGKTTTTERILYYAGKSHKIGEVHDGSATMDWMEQEQERGITITS--ASTTVFWPGRDGGQKKLTIIDTPG 89 (701)
Q Consensus 12 Nv~iiaHvd~GKTTL~d~LL~~~g~i~~~g~v~~g~~~~D~~~~E~eRgITi~s--s~~sl~~~~~~~~~~~iNlIDTPG 89 (701)
T Consensus 5 Kiv~iGd~~VGKTsli~r~~~--~~f~~-----------~~-------~~Tig~~~~~k~i~~---~~~~~~l~iwDtaG 61 (165)
T cd01868 5 KIVLIGDSGVGKSNLLSRFTR--NEFNL-----------DS-------KSTIGVEFATRSIQI---DGKTIKAQIWDTAG 61 (165)
T ss_pred EEEEECCCCCCHHHHHHHHHH--CCCCC-----------CC-------CCCCCEEEEEEEEEE---CCEEEEEEEEECCC
T ss_conf 999999999789999999972--98999-----------88-------987447878999999---99999999998999
Q ss_pred CCCCHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHH----HHHHHCCCCEEEEECCCCC
Q ss_conf 755289999999860456999955888883479999----9998739978999817676
Q gi|254780264|r 90 HVDFTMEVERSIRVTDGAIALLDSNAGVEPQTETVW----RQADKYSVPRVIFCNKMDK 144 (701)
Q Consensus 90 H~DF~~Ev~~aL~~~DgailvVDa~eGv~~qT~~vl----r~~~~~~lp~ilvINKiDr 144 (701)
T Consensus 62 ~e~~~~~~~~~~~~a~~~ilvydit~~~Sf~~i~~w~~~i~~~~~~~~~iilVgnK~DL 120 (165)
T cd01868 62 QERYRAITSAYYRGAVGALLVYDITKKQTFENVERWLKELRDHADSNIVIMLVGNKSDL 120 (165)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCH
T ss_conf 72126789987332051489862698899999999999999855577359870234786