HHsearch alignment for GI: 254780264 and conserved domain: cd01890

>cd01890 LepA LepA subfamily. LepA belongs to the GTPase family of and exhibits significant homology to the translation factors EF-G and EF-Tu, indicating its possible involvement in translation and association with the ribosome. LepA is ubiquitous in bacteria and eukaryota (e.g. yeast GUF1p), but is missing from archaea. This pattern of phyletic distribution suggests that LepA evolved through a duplication of the EF-G gene in bacteria, followed by early transfer into the eukaryotic lineage, most likely from the promitochondrial endosymbiont. Yeast GUF1p is not essential and mutant cells did not reveal any marked phenotype.
Probab=100.00  E-value=0  Score=355.72  Aligned_cols=179  Identities=39%  Similarity=0.574  Sum_probs=162.5

Q ss_pred             EEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEECCCCEECCCHHHHHHHCCCEEEEEEEEEECCCCCCCEEEEEEECCCC
Q ss_conf             27999868788977899999998087321422017956137808898708537640799996077787138999817987
Q gi|254780264|r   11 RNFGIMAHIDAGKTTTTERILYYAGKSHKIGEVHDGSATMDWMEQEQERGITITSASTTVFWPGRDGGQKKLTIIDTPGH   90 (701)
Q Consensus        11 RNv~iiaHvd~GKTTL~d~LL~~~g~i~~~g~v~~g~~~~D~~~~E~eRgITi~ss~~sl~~~~~~~~~~~iNlIDTPGH   90 (701)
T Consensus         1 RNiaiiGHvd~GKTTL~~~ll~~tg~i~~~~---~~~~~~D~~~~E~eRgiTi~~~~~~~~~~~~~~~~~~in~iDtPGh   77 (179)
T cd01890           1 RNFSIIAHIDHGKSTLADRLLELTGTVSKRE---MKEQVLDSMDLERERGITIKAQTVRLNYKAKDGQEYLLNLIDTPGH   77 (179)
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHCCCCCCCC---CCCEECCCCHHHHHCCCEEEEEEEEEEEECCCCCCEEEEEEECCCC
T ss_conf             9599994899898999999999859954145---7324416517678638668743368884136787148999989986


Q ss_pred             CCCHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCEECCC
Q ss_conf             55289999999860456999955888883479999999873997899981767658755556664111102683300023
Q gi|254780264|r   91 VDFTMEVERSIRVTDGAIALLDSNAGVEPQTETVWRQADKYSVPRVIFCNKMDKMGADFYRSVEMISSRLGANPLVIQLP  170 (701)
Q Consensus        91 ~DF~~Ev~~aL~~~DgailvVDa~eGv~~qT~~vlr~~~~~~lp~ilvINKiDr~~~d~~~~l~~i~~~l~~~~~~~~~p  170 (701)
T Consensus        78 ~dF~~~~~~al~~~D~allVVda~~Gv~~qT~~~~~~a~~~~~p~ivviNKiD~~~ad~~~v~~~i~~~~g~~~------  151 (179)
T cd01890          78 VDFSYEVSRSLAACEGALLLVDATQGVEAQTLANFYLALENNLEIIPVINKIDLPSADPERVKQQIEDVLGLDP------  151 (179)
T ss_pred             CCCHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCC------
T ss_conf             45177898899754427899864778737489999999876998899986555677899999999999868897------


Q ss_pred             CCCCCCCCEEEEEHHHHHHCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
Q ss_conf             45556653024422344311452226985138740043178899999988630023457899986327789988987300
Q gi|254780264|r  171 VGSESNFQGVIDLVEMKALLWKNEDLGSSWDVVEIPEDMKDSANSYRDKMIESIVELDDSAMDSYLQGESFSSDRIRSLI  250 (701)
Q Consensus       171 ~~~~~~~~g~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lle~i~~~dd~~~~~~l~~~~~~~~~l~~~l  250 (701)
                                                                                                      
T Consensus       152 --------------------------------------------------------------------------------  151 (179)
T cd01890         152 --------------------------------------------------------------------------------  151 (179)
T ss_pred             --------------------------------------------------------------------------------
T ss_conf             --------------------------------------------------------------------------------


Q ss_pred             CCEEECCEEEECCCCCEECCCCHHHHHHHHHHHCCCH
Q ss_conf             0003101003234310001221024889898717862
Q gi|254780264|r  251 RLGTISVKFFPVLCGSSFKNKGVQPLLDAVVDYLPSP  287 (701)
Q Consensus       251 ~~~~~~~~~~pv~~gsa~~~~Gv~~LLd~i~~~lPsP  287 (701)
T Consensus       152 ---------~~~v~vSA~~g~gv~~Ll~~i~~~ip~p  179 (179)
T cd01890         152 ---------SEAILVSAKTGLGVEDLLEAIVERIPPP  179 (179)
T ss_pred             ---------CCEEEEECCCCCCHHHHHHHHHHHCCCC
T ss_conf             ---------6748843788979899999999648898