HHsearch alignment for GI: 254780264 and conserved domain: cd01890
>cd01890 LepA LepA subfamily. LepA belongs to the GTPase family of and exhibits significant homology to the translation factors EF-G and EF-Tu, indicating its possible involvement in translation and association with the ribosome. LepA is ubiquitous in bacteria and eukaryota (e.g. yeast GUF1p), but is missing from archaea. This pattern of phyletic distribution suggests that LepA evolved through a duplication of the EF-G gene in bacteria, followed by early transfer into the eukaryotic lineage, most likely from the promitochondrial endosymbiont. Yeast GUF1p is not essential and mutant cells did not reveal any marked phenotype.
Probab=100.00 E-value=0 Score=355.72 Aligned_cols=179 Identities=39% Similarity=0.574 Sum_probs=162.5
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEECCCCEECCCHHHHHHHCCCEEEEEEEEEECCCCCCCEEEEEEECCCC
Q ss_conf 27999868788977899999998087321422017956137808898708537640799996077787138999817987
Q gi|254780264|r 11 RNFGIMAHIDAGKTTTTERILYYAGKSHKIGEVHDGSATMDWMEQEQERGITITSASTTVFWPGRDGGQKKLTIIDTPGH 90 (701)
Q Consensus 11 RNv~iiaHvd~GKTTL~d~LL~~~g~i~~~g~v~~g~~~~D~~~~E~eRgITi~ss~~sl~~~~~~~~~~~iNlIDTPGH 90 (701)
T Consensus 1 RNiaiiGHvd~GKTTL~~~ll~~tg~i~~~~---~~~~~~D~~~~E~eRgiTi~~~~~~~~~~~~~~~~~~in~iDtPGh 77 (179)
T cd01890 1 RNFSIIAHIDHGKSTLADRLLELTGTVSKRE---MKEQVLDSMDLERERGITIKAQTVRLNYKAKDGQEYLLNLIDTPGH 77 (179)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHCCCCCCCC---CCCEECCCCHHHHHCCCEEEEEEEEEEEECCCCCCEEEEEEECCCC
T ss_conf 9599994899898999999999859954145---7324416517678638668743368884136787148999989986
Q ss_pred CCCHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCEECCC
Q ss_conf 55289999999860456999955888883479999999873997899981767658755556664111102683300023
Q gi|254780264|r 91 VDFTMEVERSIRVTDGAIALLDSNAGVEPQTETVWRQADKYSVPRVIFCNKMDKMGADFYRSVEMISSRLGANPLVIQLP 170 (701)
Q Consensus 91 ~DF~~Ev~~aL~~~DgailvVDa~eGv~~qT~~vlr~~~~~~lp~ilvINKiDr~~~d~~~~l~~i~~~l~~~~~~~~~p 170 (701)
T Consensus 78 ~dF~~~~~~al~~~D~allVVda~~Gv~~qT~~~~~~a~~~~~p~ivviNKiD~~~ad~~~v~~~i~~~~g~~~------ 151 (179)
T cd01890 78 VDFSYEVSRSLAACEGALLLVDATQGVEAQTLANFYLALENNLEIIPVINKIDLPSADPERVKQQIEDVLGLDP------ 151 (179)
T ss_pred CCCHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCC------
T ss_conf 45177898899754427899864778737489999999876998899986555677899999999999868897------
Q ss_pred CCCCCCCCEEEEEHHHHHHCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
Q ss_conf 45556653024422344311452226985138740043178899999988630023457899986327789988987300
Q gi|254780264|r 171 VGSESNFQGVIDLVEMKALLWKNEDLGSSWDVVEIPEDMKDSANSYRDKMIESIVELDDSAMDSYLQGESFSSDRIRSLI 250 (701)
Q Consensus 171 ~~~~~~~~g~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lle~i~~~dd~~~~~~l~~~~~~~~~l~~~l 250 (701)
T Consensus 152 -------------------------------------------------------------------------------- 151 (179)
T cd01890 152 -------------------------------------------------------------------------------- 151 (179)
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred CCEEECCEEEECCCCCEECCCCHHHHHHHHHHHCCCH
Q ss_conf 0003101003234310001221024889898717862
Q gi|254780264|r 251 RLGTISVKFFPVLCGSSFKNKGVQPLLDAVVDYLPSP 287 (701)
Q Consensus 251 ~~~~~~~~~~pv~~gsa~~~~Gv~~LLd~i~~~lPsP 287 (701)
T Consensus 152 ---------~~~v~vSA~~g~gv~~Ll~~i~~~ip~p 179 (179)
T cd01890 152 ---------SEAILVSAKTGLGVEDLLEAIVERIPPP 179 (179)
T ss_pred ---------CCEEEEECCCCCCHHHHHHHHHHHCCCC
T ss_conf ---------6748843788979899999999648898