HHsearch alignment for GI: 254780264 and conserved domain: cd01894
>cd01894 EngA1 EngA1 subfamily. This CD represents the first GTPase domain of EngA and its orthologs, which are composed of two adjacent GTPase domains. Since the sequences of the two domains are more similar to each other than to other GTPases, it is likely that an ancient gene duplication, rather than a fusion of evolutionarily distinct GTPases, gave rise to this family. Although the exact function of these proteins has not been elucidated, studies have revealed that the E. coli EngA homolog, Der, and Neisseria gonorrhoeae EngA are essential for cell viability. A recent report suggests that E. coli Der functions in ribosome assembly and stability.
Probab=99.63 E-value=2.8e-14 Score=110.38 Aligned_cols=110 Identities=25% Similarity=0.372 Sum_probs=81.8
Q ss_pred EEECCCCCCHHHHHHHHHHHCCCCCCCCEECCCCEECCCHHHHHHHCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCCC
Q ss_conf 99868788977899999998087321422017956137808898708537640799996077787138999817987552
Q gi|254780264|r 14 GIMAHIDAGKTTTTERILYYAGKSHKIGEVHDGSATMDWMEQEQERGITITSASTTVFWPGRDGGQKKLTIIDTPGHVDF 93 (701)
Q Consensus 14 ~iiaHvd~GKTTL~d~LL~~~g~i~~~g~v~~g~~~~D~~~~E~eRgITi~ss~~sl~~~~~~~~~~~iNlIDTPGH~DF 93 (701)
T Consensus 1 aivG~pN~GKSsL~N~l~---~~~~~--ivs~------~------~gtTr~~~~~~~~~~-----~~~~~lvDTpG~~~~ 58 (157)
T cd01894 1 AIVGRPNVGKSTLFNRLT---GRRDA--IVED------T------PGVTRDRIYGEAEWG-----GREFILIDTGGIEPD 58 (157)
T ss_pred CCCCCCCCCHHHHHHHHH---CCCCE--EEEC------C------CCCEEEEEEEEEEEC-----CEEEEEEECCCCCCC
T ss_conf 904899988999999995---88753--5407------9------993566789999999-----988999857875556
Q ss_pred HHH--------HHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC
Q ss_conf 899--------9999986045699995588888347999999987399789998176765
Q gi|254780264|r 94 TME--------VERSIRVTDGAIALLDSNAGVEPQTETVWRQADKYSVPRVIFCNKMDKM 145 (701)
Q Consensus 94 ~~E--------v~~aL~~~DgailvVDa~eGv~~qT~~vlr~~~~~~lp~ilvINKiDr~ 145 (701)
T Consensus 59 ~~~~~~~~~~~~~~~i~~ad~il~viDa~~~~~~~d~~i~~~l~~~~kp~i~v~NK~D~~ 118 (157)
T cd01894 59 DEGISKEIREQAELAIEEADVILFVVDGREGLTPADEEIAKYLRKSKKPVILVVNKVDNI 118 (157)
T ss_pred CCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCC
T ss_conf 606789999999999986590799998999999899999999998479809999787165