HHsearch alignment for GI: 254780264 and conserved domain: cd01898

>cd01898 Obg Obg subfamily. The Obg nucleotide binding protein subfamily has been implicated in stress response, chromosome partitioning, replication initiation, mycelium development, and sporulation. Obg proteins are among a large group of GTP binding proteins conserved from bacteria to humans. The E. coli homolog, ObgE is believed to function in ribosomal biogenesis. Members of the subfamily contain two equally and highly conserved domains, a C-terminal GTP binding domain and an N-terminal glycine-rich domain.
Probab=99.42  E-value=7.4e-12  Score=94.84  Aligned_cols=112  Identities=21%  Similarity=0.293  Sum_probs=68.7

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHCCCCCCCCEECCCCEECCCHHHHHHHCCCEEEEEEEEEECCCCCCCEEEEEEECCCCC
Q ss_conf             79998687889778999999980873214220179561378088987085376407999960777871389998179875
Q gi|254780264|r   12 NFGIMAHIDAGKTTTTERILYYAGKSHKIGEVHDGSATMDWMEQEQERGITITSASTTVFWPGRDGGQKKLTIIDTPGHV   91 (701)
Q Consensus        12 Nv~iiaHvd~GKTTL~d~LL~~~g~i~~~g~v~~g~~~~D~~~~E~eRgITi~ss~~sl~~~~~~~~~~~iNlIDTPGH~   91 (701)
T Consensus         2 ~VAiiG~pNvGKSTLlN~l~---~~~~~V~~-~pgTT~--------------~~~~g~i~~~----~~~~i~~~DtpGi~   59 (170)
T cd01898           2 DVGLVGLPNAGKSTLLSAIS---NAKPKIAD-YPFTTL--------------VPNLGVVRVD----DGRSFVVADIPGLI   59 (170)
T ss_pred             CEEEECCCCCCHHHHHHHHH---CCCCEEEC-CCCCCC--------------CCEEEEEEEC----CCCEEEEECCCCCC
T ss_conf             58998999998999999996---78760325-666523--------------7447799936----98569996488644


Q ss_pred             -----CC--HHHHHHHHHHHCEEEEEEECCCCCCH--HHHHHHHHHHH-----CCCCEEEEECCCCCC
Q ss_conf             -----52--89999999860456999955888883--47999999987-----399789998176765
Q gi|254780264|r   92 -----DF--TMEVERSIRVTDGAIALLDSNAGVEP--QTETVWRQADK-----YSVPRVIFCNKMDKM  145 (701)
Q Consensus        92 -----DF--~~Ev~~aL~~~DgailvVDa~eGv~~--qT~~vlr~~~~-----~~lp~ilvINKiDr~  145 (701)
T Consensus        60 ~~~~~~~~l~~~~l~~i~~advil~vvD~~~~~~~~~~~~~i~~~l~~~~~~~~~kp~ilv~NK~Dl~  127 (170)
T cd01898          60 EGASEGKGLGHRFLRHIERTRLLLHVIDLSGDDDPVEDYKTIRNELELYNPELLEKPRIVVLNKIDLL  127 (170)
T ss_pred             CCCCCCCCHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCHHHHCCCCEEEEEHHHCC
T ss_conf             45546622489998613345617999989987898999999999999827444038650677620242