HHsearch alignment for GI: 254780264 and conserved domain: cd01983

>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.
Probab=94.96  E-value=0.16  Score=28.55  Aligned_cols=90  Identities=21%  Similarity=0.165  Sum_probs=53.8

Q ss_pred             EEEECCCCCCHHHHHHHHHHHCCCCCCCC-EECCCCEECCCHHHHHHHCCCEEEEEEEEEECCCCCCCEEEEEEECCCCC
Q ss_conf             99986878897789999999808732142-20179561378088987085376407999960777871389998179875
Q gi|254780264|r   13 FGIMAHIDAGKTTTTERILYYAGKSHKIG-EVHDGSATMDWMEQEQERGITITSASTTVFWPGRDGGQKKLTIIDTPGHV   91 (701)
Q Consensus        13 v~iiaHvd~GKTTL~d~LL~~~g~i~~~g-~v~~g~~~~D~~~~E~eRgITi~ss~~sl~~~~~~~~~~~iNlIDTPGH~   91 (701)
T Consensus         2 i~~~~~kGvGKTT~a~~La~~la~---~g~~Vl----~vD-----------------------------d~iiiD~~~~~   45 (99)
T cd01983           2 IVVTGKGGVGKTTLAANLAAALAK---RGKRVL----LID-----------------------------DYVLIDTPPGL   45 (99)
T ss_pred             EEEECCCCCCHHHHHHHHHHHHHH---CCCEEE----EEC-----------------------------CCEEECCCCCC
T ss_conf             898589977689999999999998---899699----986-----------------------------71788589988


Q ss_pred             CCHHHH---HHHHHHHCEEEEEEECCCCCCHHHHHH----HHHHHHCCCCEEEEEC
Q ss_conf             528999---999986045699995588888347999----9999873997899981
Q gi|254780264|r   92 DFTMEV---ERSIRVTDGAIALLDSNAGVEPQTETV----WRQADKYSVPRVIFCN  140 (701)
Q Consensus        92 DF~~Ev---~~aL~~~DgailvVDa~eGv~~qT~~v----lr~~~~~~lp~ilvIN  140 (701)
T Consensus        46 ~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~n   99 (99)
T cd01983          46 GL--LVLLCLLALLAADLVIIVTTPEALAVLGARRLTEVVLELAIEGLRPVGVVVN   99 (99)
T ss_pred             CH--HHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECC
T ss_conf             84--6899998787589589965984889999999999999841069815788539