HHsearch alignment for GI: 254780264 and conserved domain: cd01983
>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.
Probab=94.96 E-value=0.16 Score=28.55 Aligned_cols=90 Identities=21% Similarity=0.165 Sum_probs=53.8
Q ss_pred EEEECCCCCCHHHHHHHHHHHCCCCCCCC-EECCCCEECCCHHHHHHHCCCEEEEEEEEEECCCCCCCEEEEEEECCCCC
Q ss_conf 99986878897789999999808732142-20179561378088987085376407999960777871389998179875
Q gi|254780264|r 13 FGIMAHIDAGKTTTTERILYYAGKSHKIG-EVHDGSATMDWMEQEQERGITITSASTTVFWPGRDGGQKKLTIIDTPGHV 91 (701)
Q Consensus 13 v~iiaHvd~GKTTL~d~LL~~~g~i~~~g-~v~~g~~~~D~~~~E~eRgITi~ss~~sl~~~~~~~~~~~iNlIDTPGH~ 91 (701)
T Consensus 2 i~~~~~kGvGKTT~a~~La~~la~---~g~~Vl----~vD-----------------------------d~iiiD~~~~~ 45 (99)
T cd01983 2 IVVTGKGGVGKTTLAANLAAALAK---RGKRVL----LID-----------------------------DYVLIDTPPGL 45 (99)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHH---CCCEEE----EEC-----------------------------CCEEECCCCCC
T ss_conf 898589977689999999999998---899699----986-----------------------------71788589988
Q ss_pred CCHHHH---HHHHHHHCEEEEEEECCCCCCHHHHHH----HHHHHHCCCCEEEEEC
Q ss_conf 528999---999986045699995588888347999----9999873997899981
Q gi|254780264|r 92 DFTMEV---ERSIRVTDGAIALLDSNAGVEPQTETV----WRQADKYSVPRVIFCN 140 (701)
Q Consensus 92 DF~~Ev---~~aL~~~DgailvVDa~eGv~~qT~~v----lr~~~~~~lp~ilvIN 140 (701)
T Consensus 46 ~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~n 99 (99)
T cd01983 46 GL--LVLLCLLALLAADLVIIVTTPEALAVLGARRLTEVVLELAIEGLRPVGVVVN 99 (99)
T ss_pred CH--HHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECC
T ss_conf 84--6899998787589589965984889999999999999841069815788539