HHsearch alignment for GI: 254780264 and conserved domain: cd03114
>cd03114 ArgK-like The function of this protein family is unkown. The protein sequences are similar to the ArgK protein in E. coli. ArgK protein is a membrane ATPase which is required for transporting arginine, ornithine and lysine into the cells by the arginine and ornithine (AO system) and lysine, arginine and ornithine (LAO) transport systems.
Probab=97.07 E-value=0.0023 Score=40.37 Aligned_cols=124 Identities=23% Similarity=0.351 Sum_probs=71.5
Q ss_pred EEEECCCCCCHHHHHHHHHHHC-CCCCCCC--------EECCCCEECCCHHHH---HHHCCCEEEEEEEEEECCC-----
Q ss_conf 9998687889778999999980-8732142--------201795613780889---8708537640799996077-----
Q gi|254780264|r 13 FGIMAHIDAGKTTTTERILYYA-GKSHKIG--------EVHDGSATMDWMEQE---QERGITITSASTTVFWPGR----- 75 (701)
Q Consensus 13 v~iiaHvd~GKTTL~d~LL~~~-g~i~~~g--------~v~~g~~~~D~~~~E---~eRgITi~ss~~sl~~~~~----- 75 (701)
T Consensus 2 iGitG~pGaGKStLi~~l~~~~~~~g~~VaVlavDPsS~~sgGalLGDRiRm~~~~~~~~vfiRs~atrg~~ggla~~~~ 81 (148)
T cd03114 2 IGITGVPGAGKSTLIDALITALRARGKRVAVLAIDPSSPFSGGAILGDRIRMERHASDPGVFIRSLATRGFLGGLSRATP 81 (148)
T ss_pred EEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHH
T ss_conf 76258997878999999999999789837999968887866862032354534415799836863466665420468899
Q ss_pred ------CCCCEEEEEEECCCCCCCHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCC
Q ss_conf ------78713899981798755289999999860456999955888883479999999873997899981767
Q gi|254780264|r 76 ------DGGQKKLTIIDTPGHVDFTMEVERSIRVTDGAIALLDSNAGVEPQTETVWRQADKYSVPRVIFCNKMD 143 (701)
Q Consensus 76 ------~~~~~~iNlIDTPGH~DF~~Ev~~aL~~~DgailvVDa~eGv~~qT~~vlr~~~~~~lp~ilvINKiD 143 (701)
T Consensus 82 ~~i~~l~~~g~D~IiIETvGv--GQse~~i~-~~aD~~i~v~~p~~GD~iQ~~K----~gi~e~aDl~vvNK~D 148 (148)
T cd03114 82 EVIRVLDAAGFDVIIVETVGV--GQSEVDIA-SMADTTVVVMAPGAGDDIQAIK----AGIMEIADIVVVNKAD 148 (148)
T ss_pred HHHHHHHHCCCCEEEEECCCC--CCCHHHHH-HHCCEEEEEECCCCCCHHHHCC----CCHHHCCCEEEEECCC
T ss_conf 999999975999899974877--75602655-4356699996368873776112----2852124699993789