>cd04108 Rab36_Rab34 Rab34/Rab36 subfamily. Rab34, found primarily in the Golgi, interacts with its effector, Rab-interacting lysosomal protein (RILP). This enables its participation in microtubular dynenin-dynactin-mediated repositioning of lysosomes from the cell periphery to the Golgi. A Rab34 (Rah) isoform that lacks the consensus GTP-binding region has been identified in mice. This isoform is associated with membrane ruffles and promotes macropinosome formation. Rab36 has been mapped to human chromosome 22q11.2, a region that is homozygously deleted in malignant rhabdoid tumors (MRTs). However, experimental assessments do not implicate Rab36 as a tumor suppressor that would enable tumor formation through a loss-of-function mechanism. GTPase activating proteins (GAPs) interact with GTP-bound Rab and accelerate the hydrolysis of GTP to GDP. Guanine nucleotide exchange factors (GEFs) interact with GDP-bound Rabs to promote the formation of the GTP-bound state. Rabs are further re

Probab=98.59 E-value=3.6e-07 Score=64.75 Aligned_cols=112 Identities=20% Similarity=0.164 Sum_probs=72.8 Q ss_pred EEEECCCCCCHHHHHHHHHHHCCCCCCCCEECCCCEECCCHHHHHHHCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCC Q ss_conf 99986878897789999999808732142201795613780889870853764079999607778713899981798755 Q gi|254780264|r 13 FGIMAHIDAGKTTTTERILYYAGKSHKIGEVHDGSATMDWMEQEQERGITITSASTTVFWPGRDGGQKKLTIIDTPGHVD 92 (701) Q Consensus 13 v~iiaHvd~GKTTL~d~LL~~~g~i~~~g~v~~g~~~~D~~~~E~eRgITi~ss~~sl~~~~~~~~~~~iNlIDTPGH~D 92 (701) T Consensus 3 ivlvGd~~VGKTsli~r~~~--~~f~~----~----y~~T------ig~d~~~k~--~~v---~~~~~~l~iwDtaGqe~ 61 (170) T cd04108 3 VIVVGDLSVGKTCLINRFCK--DVFDK----N----YKAT------IGVDFEMER--FEI---LGVPFSLQLWDTAGQER 61 (170) T ss_pred EEEECCCCCCHHHHHHHHHC--CCCCC----C----CCCC------CCEEEEEEE--EEE---CCEEEEEEEEECCCCCC T ss_conf 99999899898999999963--98899----7----2563------450589999--999---99999999998999974 Q ss_pred CHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHH-HHHHH----CCCCEEEEECCCCCC Q ss_conf 289999999860456999955888883479999-99987----399789998176765 Q gi|254780264|r 93 FTMEVERSIRVTDGAIALLDSNAGVEPQTETVW-RQADK----YSVPRVIFCNKMDKM 145 (701) Q Consensus 93 F~~Ev~~aL~~~DgailvVDa~eGv~~qT~~vl-r~~~~----~~lp~ilvINKiDr~ 145 (701) T Consensus 62 f~~l~~~y~r~a~~~ilvyDvt~~~Sf~~~~~w~~~~~~~~~~~~~~i~LvgNK~DL~ 119 (170) T cd04108 62 FKCIASTYYRGAQAIIIVFDLTDVASLEHTRQWLEDALKENDPSSVLLFLVGTKKDLS 119 (170) T ss_pred CCCCHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC T ss_conf 6644377732787589999789878999999999999985089998299999841379

HHsearch alignment for GI: 254780264 and conserved domain: cd04108