HHsearch alignment for GI: 254780264 and conserved domain: cd04129

>cd04129 Rho2 Rho2 subfamily. Rho2 is a fungal GTPase that plays a role in cell morphogenesis, control of cell wall integrity, control of growth polarity, and maintenance of growth direction. Rho2 activates the protein kinase C homolog Pck2, and Pck2 controls Mok1, the major (1-3) alpha-D-glucan synthase. Together with Rho1 (RhoA), Rho2 regulates the construction of the cell wall. Unlike Rho1, Rho2 is not an essential protein, but its overexpression is lethal. Most Rho proteins contain a lipid modification site at the C-terminus, with a typical sequence motif CaaX, where a = an aliphatic amino acid and X = any amino acid. Lipid binding is essential for proper intracellular localization via membrane attachment. As with other Rho family GTPases, the GDP/GTP cycling is regulated by GEFs (guanine nucleotide exchange factors), GAPs (GTPase-activating proteins) and GDIs (guanine nucleotide dissociation inhibitors).
Probab=98.22  E-value=1.7e-05  Score=53.97  Aligned_cols=111  Identities=18%  Similarity=0.170  Sum_probs=72.5

Q ss_pred             EEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEECCCCEECCCHHHHHHHCCCEEEEEE-EEEECCCCCCCEEEEEEECCC
Q ss_conf             2799986878897789999999808732142201795613780889870853764079-999607778713899981798
Q gi|254780264|r   11 RNFGIMAHIDAGKTTTTERILYYAGKSHKIGEVHDGSATMDWMEQEQERGITITSAST-TVFWPGRDGGQKKLTIIDTPG   89 (701)
Q Consensus        11 RNv~iiaHvd~GKTTL~d~LL~~~g~i~~~g~v~~g~~~~D~~~~E~eRgITi~ss~~-sl~~~~~~~~~~~iNlIDTPG   89 (701)
T Consensus         2 ~KivllGd~~VGKTsLi~r~~~--~~f~~--------~y~----------pTi~~~~~~~i~---v~~~~v~l~iwDTaG   58 (187)
T cd04129           2 RKLVIVGDGACGKTSLLSVFTL--GEFPE--------EYH----------PTVFENYVTDCR---VDGKPVQLALWDTAG   58 (187)
T ss_pred             EEEEEECCCCCCHHHHHHHHHH--CCCCC--------CCC----------CCEEEEEEEEEE---ECCEEEEEEEEECCC
T ss_conf             1999999899768999999982--98999--------878----------866789899999---999999999997888


Q ss_pred             CCCCHHHHHHHHHHHCEEEEEEECCCCCCHHHH-HHH-HHHH--HCCCCEEEEECCCCC
Q ss_conf             755289999999860456999955888883479-999-9998--739978999817676
Q gi|254780264|r   90 HVDFTMEVERSIRVTDGAIALLDSNAGVEPQTE-TVW-RQAD--KYSVPRVIFCNKMDK  144 (701)
Q Consensus        90 H~DF~~Ev~~aL~~~DgailvVDa~eGv~~qT~-~vl-r~~~--~~~lp~ilvINKiDr  144 (701)
T Consensus        59 ~e~~~~~~~~~~~~a~~~ilvydi~~~~Sf~~~~~~w~~~~~~~~~~~piilVGnK~DL  117 (187)
T cd04129          59 QEEYERLRPLSYSKAHVILIGFAVDTPDSLENVRTKWIEEVRRYCPNVPVILVGLKKDL  117 (187)
T ss_pred             CCCCCCCCCCEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
T ss_conf             70345460412338858999702698667999999999999985879988999886001