HHsearch alignment for GI: 254780264 and conserved domain: cd04145
>cd04145 M_R_Ras_like M-Ras/R-Ras-like subfamily. This subfamily contains R-Ras2/TC21, M-Ras/R-Ras3, and related members of the Ras family. M-Ras is expressed in lympho-hematopoetic cells. It interacts with some of the known Ras effectors, but appears to also have its own effectors. Expression of mutated M-Ras leads to transformation of several types of cell lines, including hematopoietic cells, mammary epithelial cells, and fibroblasts. Overexpression of M-Ras is observed in carcinomas from breast, uterus, thyroid, stomach, colon, kidney, lung, and rectum. In addition, expression of a constitutively active M-Ras mutant in murine bone marrow induces a malignant mast cell leukemia that is distinct from the monocytic leukemia induced by H-Ras. TC21, along with H-Ras, has been shown to regulate the branching morphogenesis of ureteric bud cell branching in mice. Most Ras proteins contain a lipid modification site at the C-terminus, with a typical sequence motif CaaX, where a = an ali
Probab=98.67 E-value=1.2e-07 Score=67.78 Aligned_cols=110 Identities=19% Similarity=0.224 Sum_probs=75.0
Q ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCCCCCEECCCCEECCCHHHHHHHCCCEEEEE-EEEEECCCCCCCEEEEEEECCCC
Q ss_conf 79998687889778999999980873214220179561378088987085376407-99996077787138999817987
Q gi|254780264|r 12 NFGIMAHIDAGKTTTTERILYYAGKSHKIGEVHDGSATMDWMEQEQERGITITSAS-TTVFWPGRDGGQKKLTIIDTPGH 90 (701)
Q Consensus 12 Nv~iiaHvd~GKTTL~d~LL~~~g~i~~~g~v~~g~~~~D~~~~E~eRgITi~ss~-~sl~~~~~~~~~~~iNlIDTPGH 90 (701)
T Consensus 4 Kiv~lGd~~VGKTsli~r~~~--~~f~~--~------y~~----------Ti~~~~~k~~~---~~~~~~~l~iwDtaG~ 60 (164)
T cd04145 4 KLVVVGGGGVGKSALTIQFIQ--SYFVT--D------YDP----------TIEDSYTKQCE---IDGQWAILDILDTAGQ 60 (164)
T ss_pred EEEEECCCCCCHHHHHHHHHC--CCCCC--C------CCC----------CEEEEEEEEEE---ECCEEEEEEEEECCCC
T ss_conf 999999999788999999980--98987--5------678----------41358999999---9999999999989886
Q ss_pred CCCHHHHHHHHHHHCEEEEEEECCCCCCHHH-HHHHHHHH----HCCCCEEEEECCCCC
Q ss_conf 5528999999986045699995588888347-99999998----739978999817676
Q gi|254780264|r 91 VDFTMEVERSIRVTDGAIALLDSNAGVEPQT-ETVWRQAD----KYSVPRVIFCNKMDK 144 (701)
Q Consensus 91 ~DF~~Ev~~aL~~~DgailvVDa~eGv~~qT-~~vlr~~~----~~~lp~ilvINKiDr 144 (701)
T Consensus 61 e~~~~~~~~~~~~a~~~ilvydi~~~~Sf~~~~~~~~~i~~~~~~~~~piilVgNK~DL 119 (164)
T cd04145 61 EEFSAMREQYMRTGEGFLLVFSVTDRGSFEEVDKFHTQILRVKDRDEFPMILVGNKADL 119 (164)
T ss_pred CCCCHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCH
T ss_conf 03125679873467874689856735439999999999998618877752653034573