HHsearch alignment for GI: 254780264 and conserved domain: smart00174

>smart00174 RHO Rho (Ras homology) subfamily of Ras-like small GTPases. Members of this subfamily of Ras-like small GTPases include Cdc42 and Rac, as well as Rho isoforms.

Probab=98.79  E-value=2.5e-07  Score=65.75  Aligned_cols=109  Identities=18%  Similarity=0.150  Sum_probs=70.6

Q ss_pred             EEEECCCCCCHHHHHHHHHHHCCCCCCCCEECCCCEECCCHHHHHHHCCCEEEE-EEEEEECCCCCCCEEEEEEECCCCC
Q ss_conf             999868788977899999998087321422017956137808898708537640-7999960777871389998179875
Q gi|254780264|r   13 FGIMAHIDAGKTTTTERILYYAGKSHKIGEVHDGSATMDWMEQEQERGITITSA-STTVFWPGRDGGQKKLTIIDTPGHV   91 (701)
Q Consensus        13 v~iiaHvd~GKTTL~d~LL~~~g~i~~~g~v~~g~~~~D~~~~E~eRgITi~ss-~~sl~~~~~~~~~~~iNlIDTPGH~   91 (701)
T Consensus         1 ivllGd~~VGKTsli~r~~~--~~f~~--~------y~----------~Ti~~~~~~~~~~---~~~~~~l~i~DtaG~e   57 (174)
T smart00174        1 LVVVGDGAVGKTCLLISYTT--NAFPE--D------YV----------PTVFENYSADVEV---DGKPVELGLWDTAGQE   57 (174)
T ss_pred             EEEECCCCCCHHHHHHHHHH--CCCCC--C------CC----------CCEEEEEEEEEEE---CCEEEEEEEEECCCCC
T ss_conf             59989789759999999953--98999--8------57----------8505789999999---9999999999489870


Q ss_pred             CCHHHHHHHHHHHCEEEEEEECCCCCCHHHH-HHHHHH---HHCCCCEEEEECCCCC
Q ss_conf             5289999999860456999955888883479-999999---8739978999817676
Q gi|254780264|r   92 DFTMEVERSIRVTDGAIALLDSNAGVEPQTE-TVWRQA---DKYSVPRVIFCNKMDK  144 (701)
Q Consensus        92 DF~~Ev~~aL~~~DgailvVDa~eGv~~qT~-~vlr~~---~~~~lp~ilvINKiDr  144 (701)
T Consensus        58 ~~~~l~~~~~~~a~~~ilvydvt~~~Sf~~~~~~w~~~i~~~~~~~piilVgnK~DL  114 (174)
T smart00174       58 DYDRLRPLSYPDTDVFLICFSVDSPASFENVKEKWYPEVKHFCPNTPIILVGTKLDL  114 (174)
T ss_pred             CCCCCCHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
T ss_conf             345450011048868999975898789999999899999986889869999875425