RPSBLAST alignment for GI: 254780264 and conserved domain: TIGR00485
>gnl|CDD|129576 TIGR00485, EF-Tu, translation elongation factor TU. This alignment models orthologs of translation elongation factor EF-Tu in bacteria, mitochondria, and chloroplasts, one of several GTP-binding translation factors found by the more general pfam model GTP_EFTU. The eukaryotic conterpart, eukaryotic translation elongation factor 1 (eEF-1 alpha), is excluded from this model. EF-Tu is one of the most abundant proteins in bacteria, as well as one of the most highly conserved, and in a number of species the gene is duplicated with identical function. When bound to GTP, EF-Tu can form a complex with any (correctly) aminoacylated tRNA except those for initiation and for selenocysteine, in which case EF-Tu is replaced by other factors. Transfer RNA is carried to the ribosome in these complexes for protein translation. Length = 394
Score = 55.6 bits (134), Expect = 5e-08
Identities = 42/138 (30%), Positives = 58/138 (42%), Gaps = 18/138 (13%)
Query: 12 NFGIMAHIDAGKTTTTERILYYAGKSHKIGEVHDGSATMDWME-----QEQERGITITSA 66
N G + H+D GKTT T I K G+A + + +E+ RGITI +A
Sbjct: 14 NIGTIGHVDHGKTTLTAAITTVLAK-------EGGAAARAYDQIDNAPEEKARGITINTA 66
Query: 67 STTVFWPGRDGGQKKLTIIDTPGHVDFTMEVERSIRVTDGAIALLDSNAGVEPQTETVWR 126
R +D PGH D+ + DGAI ++ + G PQT
Sbjct: 67 HVEYETENRHYAH-----VDCPGHADYVKNMITGAAQMDGAILVVSATDGPMPQTREHIL 121
Query: 127 QADKYSVPR-VIFCNKMD 143
A + VP V+F NK D
Sbjct: 122 LARQVGVPYIVVFLNKCD 139