RPSBLAST alignment for GI: 254780264 and conserved domain: COG4108
>gnl|CDD|33865 COG4108, PrfC, Peptide chain release factor RF-3 [Translation, ribosomal structure and biogenesis]. Length = 528
Score = 209 bits (534), Expect = 2e-54
Identities = 130/484 (26%), Positives = 220/484 (45%), Gaps = 44/484 (9%)
Query: 7 IEDSRNFGIMAHIDAGKTTTTERILYYAGKSHKIGEVH----DGSATMDWMEQEQERGIT 62
+ R F I++H DAGKTT TE++L + G + G V A DWME E++RGI+
Sbjct: 9 VARRRTFAIISHPDAGKTTLTEKLLLFGGAIQEAGTVKGRKSGKHAKSDWMEIEKQRGIS 68
Query: 63 ITSASTTVFWPGRDGGQKKLTIIDTPGHVDFTMEVERSIRVTDGAIALLDSNAGVEPQTE 122
+TS+ + + ++DTPGH DF+ + R++ D A+ ++D+ G+EPQT
Sbjct: 69 VTSSVMQFDYAD-----CLVNLLDTPGHEDFSEDTYRTLTAVDSAVMVIDAAKGIEPQTL 123
Query: 123 TVWRQADKYSVPRVIFCNKMDKMGADFYRSVEMISSRLGANPLVIQLPVGSESNFQGVID 182
++ +P F NK+D+ G D ++ I LG I P+G +F+GV
Sbjct: 124 KLFEVCRLRDIPIFTFINKLDREGRDPLELLDEIEEELGIQCAPITWPIGMGKDFKGVYH 183
Query: 183 LVEMKALLWKNEDLGS--SWDVVEIPEDMKDSA---NSYRDKMIESIVELDDSAMDSYLQ 237
L + L+++ D+V+ ++ + A +++ E + EL A
Sbjct: 184 LYNDEVELYESGHTDQERRADIVKGLDNPELDALLGEDLAEQLREEL-ELVQGA------ 236
Query: 238 GESFSSDRIRSLIRLGTISVKFFPVLCGSSFKNKGVQPLLDAVVDYLPSPLDVRAIKGVD 297
G F + + G ++ PV GS+ N GV LDA+VD+ PSP +A
Sbjct: 237 GNEFDLEAFLA----GELT----PVFFGSALGNFGVDHFLDALVDWAPSPRARQADTRE- 287
Query: 298 VKSNSEIDVSAVDSSPLSMLAFKVMAD---SFVGSLTFCRIYSGKISKGDSLLNTVKGKK 354
V + S FK+ A+ + F R+ SGK +G + + GK
Sbjct: 288 --------VEPTEDK-FSGFVFKIQANMDPKHRDRIAFMRVCSGKFERGMKVTHVRTGKD 338
Query: 355 ERVGRMLQMHSNSREDIDEAYCGDIIALAGLKETTTGDTLCDPSRPIVLERMDFPEPVIQ 414
++ L + RE ++EAY GDII L GDT + + + P +
Sbjct: 339 VKLSDALTFMAQDRETVEEAYAGDIIGLHNHGTIQIGDTFTE-GEKLKFTGIPNFAPELF 397
Query: 415 IAIEPKSKGDQERMSLALSRLVAEDPSLRVSMDPNSGQTNLSGMGELHLEIIVDRMLREF 474
+ K Q+++ L +L AE+ +++V + L +G+L E++ R+ E+
Sbjct: 398 RRVRLKDPLKQKQLKKGLEQL-AEEGAVQVFKPLDGNDLILGAVGQLQFEVVQARLKNEY 456
Query: 475 KVDA 478
V+A
Sbjct: 457 NVEA 460