>gnl|CDD|58091 cd03700, eEF2_snRNP_like_II, EF2_snRNP_like_II: this subfamily represents domain II of elongation factor (EF) EF-2 found eukaryotes and archaea and, the C-terminal portion of the spliceosomal human 116kD U5 small nuclear ribonucleoprotein (snRNP) protein (U5-116 kD) and, its yeast counterpart Snu114p. During the process of peptide synthesis and tRNA site changes, the ribosome is moved along the mRNA a distance equal to one codon with the addition of each amino acid. This translocation step is catalyzed by EF-2_GTP, which is hydrolyzed to provide the required energy. Thus, this action releases the uncharged tRNA from the P site and transfers the newly formed peptidyl-tRNA from the A site to the P site. Yeast Snu114p is essential for cell viability and for splicing in vivo. U5-116 kD binds GTP. Experiments suggest that GTP binding and probably GTP hydrolysis is important for the function of the U5-116 kD/Snu114p.. Length = 93

 Score = 46.3 bits (110), Expect = 2e-05
 Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 10/90 (11%)

Query: 314 LSMLAFKVMADSFVGSL-TFCRIYSGKISKGDSLL----NTVKGKKE-----RVGRMLQM 363
           L M   K++     G    F R++SG I KG  +     N     +E      + R+  M
Sbjct: 1   LVMYVTKMVPTPDKGGFIAFGRVFSGTIRKGQKVRVLGPNYSPEDEEDLSKKTIQRLYLM 60

Query: 364 HSNSREDIDEAYCGDIIALAGLKETTTGDT 393
               RE +DE   G+I+ + GL +  +G T
Sbjct: 61  MGRYREPVDEVPAGNIVLIVGLDQLKSGTT 90