HHsearch alignment for GI: 254780265 and conserved domain: PTZ00091

>PTZ00091 40S ribosomal protein S5; Provisional.
Probab=100.00  E-value=2.8e-45  Score=293.63  Aligned_cols=132  Identities=30%  Similarity=0.429  Sum_probs=127.5

Q ss_pred             CCCHHHHHHHHHHHHC----CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCEECEEECCH
Q ss_conf             3787999999999766----959999999999998667424886389999999842754047787524630000010485
Q gi|254780265|r   18 FSDFVVAKFMNAIMYG----GKKSVAVSIVYGAFDLVEKKEKKDPVALFRQALINVTPQFEVRTRRVGGAAYSVPGEITS   93 (156)
Q Consensus        18 y~~~lv~kliN~lMk~----GKK~~A~kIv~~al~~I~~~~~~npi~il~~Ai~n~~P~~evk~~r~gG~~yqvP~~i~~   93 (156)
T Consensus        51 ~~~~IVERlin~lM~~g~n~GKK~~A~~Iv~~AfdiI~~kT~~nPlqV~~~Ai~N~~PreEv~~~r~GG~~yqv~VdVsp  130 (191)
T PTZ00091         51 AQCPIVERLANSLMFHGRNNGKKLKAVRIVRHAFEIIHLLTDKNPLQVLVDAVQKGGPREDSTRVGSGGVVRRQAVDVSP  130 (191)
T ss_pred             CCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEEECCEEEEECEECCH
T ss_conf             56852499888876058777709999999999999999985898499999999841871689999737776783435363


Q ss_pred             HHHHHHHHHHHHHHHHH---CCCCCHHHHHHHHHHHHHCCCCC--CEECHHHHHHHHHHHH
Q ss_conf             79999999999999985---79999899999999999738887--2630788999999988
Q gi|254780265|r   94 KRSQALAIRWLIMAARK---RNETTMIDRLGGEIIDAANNRGV--AVRKREETHKVAEANR  149 (156)
Q Consensus        94 ~r~~~lAirWii~~a~~---r~~~~~~~~La~Eii~A~~~~g~--aikkK~elhk~A~aNR  149 (156)
T Consensus       131 ~Rrv~lAlrwi~~gar~~afr~~ksm~e~LA~Eli~Aa~~~~~s~AIkKKee~eRmAeanR  191 (191)
T PTZ00091        131 MRRVNEAIYLLCKGAREAAFRNLKTIAECLADEIINASKGSSNSYAIKKKDEVERVAKANR  191 (191)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHCC
T ss_conf             7899999999999999870159883999999999999728888754230788999887548