HHsearch alignment for GI: 254780265 and conserved domain: PTZ00091
>PTZ00091 40S ribosomal protein S5; Provisional.
Probab=100.00 E-value=2.8e-45 Score=293.63 Aligned_cols=132 Identities=30% Similarity=0.429 Sum_probs=127.5
Q ss_pred CCCHHHHHHHHHHHHC----CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCEECEEECCH
Q ss_conf 3787999999999766----959999999999998667424886389999999842754047787524630000010485
Q gi|254780265|r 18 FSDFVVAKFMNAIMYG----GKKSVAVSIVYGAFDLVEKKEKKDPVALFRQALINVTPQFEVRTRRVGGAAYSVPGEITS 93 (156)
Q Consensus 18 y~~~lv~kliN~lMk~----GKK~~A~kIv~~al~~I~~~~~~npi~il~~Ai~n~~P~~evk~~r~gG~~yqvP~~i~~ 93 (156)
T Consensus 51 ~~~~IVERlin~lM~~g~n~GKK~~A~~Iv~~AfdiI~~kT~~nPlqV~~~Ai~N~~PreEv~~~r~GG~~yqv~VdVsp 130 (191)
T PTZ00091 51 AQCPIVERLANSLMFHGRNNGKKLKAVRIVRHAFEIIHLLTDKNPLQVLVDAVQKGGPREDSTRVGSGGVVRRQAVDVSP 130 (191)
T ss_pred CCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEEECCEEEEECEECCH
T ss_conf 56852499888876058777709999999999999999985898499999999841871689999737776783435363
Q ss_pred HHHHHHHHHHHHHHHHH---CCCCCHHHHHHHHHHHHHCCCCC--CEECHHHHHHHHHHHH
Q ss_conf 79999999999999985---79999899999999999738887--2630788999999988
Q gi|254780265|r 94 KRSQALAIRWLIMAARK---RNETTMIDRLGGEIIDAANNRGV--AVRKREETHKVAEANR 149 (156)
Q Consensus 94 ~r~~~lAirWii~~a~~---r~~~~~~~~La~Eii~A~~~~g~--aikkK~elhk~A~aNR 149 (156)
T Consensus 131 ~Rrv~lAlrwi~~gar~~afr~~ksm~e~LA~Eli~Aa~~~~~s~AIkKKee~eRmAeanR 191 (191)
T PTZ00091 131 MRRVNEAIYLLCKGAREAAFRNLKTIAECLADEIINASKGSSNSYAIKKKDEVERVAKANR 191 (191)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHCC
T ss_conf 7899999999999999870159883999999999999728888754230788999887548