HHsearch alignment for GI: 254780265 and conserved domain: pfam00177
>pfam00177 Ribosomal_S7 Ribosomal protein S7p/S5e. This family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.
Probab=100.00 E-value=0 Score=352.62 Aligned_cols=149 Identities=55% Similarity=0.894 Sum_probs=147.9
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEEE
Q ss_conf 98989997555799974378799999999976695999999999999866742488638999999984275404778752
Q gi|254780265|r 1 MSRRRRAVVREVLPDPKFSDFVVAKFMNAIMYGGKKSVAVSIVYGAFDLVEKKEKKDPVALFRQALINVTPQFEVRTRRV 80 (156)
Q Consensus 1 m~Rr~~~~kr~~~pD~~y~~~lv~kliN~lMk~GKK~~A~kIv~~al~~I~~~~~~npi~il~~Ai~n~~P~~evk~~r~ 80 (156)
T Consensus 1 M~r~~~~~kr~~~~d~~~~~~lv~k~iN~lM~~GKK~~A~kiv~~al~~I~~~~~~~Pi~vl~~Ai~n~~P~~ev~s~r~ 80 (149)
T pfam00177 1 MPRRGRAKKREVLPDPKYNSRLVEKLINKLMKDGKKSLAEKIVYKAFEIIEEKTGKNPLEVLVQAIENVKPRVEVKSRRV 80 (149)
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEECC
T ss_conf 98999998887899977688899999999885143999999999999999985569879999999997699502576203
Q ss_pred CCCCEECEEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHH
Q ss_conf 463000001048579999999999999985799998999999999997388872630788999999988
Q gi|254780265|r 81 GGAAYSVPGEITSKRSQALAIRWLIMAARKRNETTMIDRLGGEIIDAANNRGVAVRKREETHKVAEANR 149 (156)
Q Consensus 81 gG~~yqvP~~i~~~r~~~lAirWii~~a~~r~~~~~~~~La~Eii~A~~~~g~aikkK~elhk~A~aNR 149 (156)
T Consensus 81 GG~~yqvPv~v~~~r~~~lAirWii~~ar~r~~~~~~~~La~Eii~A~~~~g~aikKk~e~hk~A~aNR 149 (149)
T pfam00177 81 GGATYQVPVEVSPERRVALAIRWILKAARKRSGKSMAEKLANELIDAANNKGSAIKKKEETHKMAEANR 149 (149)
T ss_pred CCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCC
T ss_conf 877788555378889999999999999987599988999999999999689975540899999998568