HHsearch alignment of GI: 254780265 and MMDB domain: 2zkq_g_
>2zkq_g (g:) 40S ribosomal protein S5E; protein-RNA complex, 40S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=100.00 E-value=0 Score=316.24 Aligned_cols=149 Identities=26% Similarity=0.312 Sum_probs=144.5
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEEE
Q ss_conf 98989997555799974378799999999976695999999999999866742488638999999984275404778752
Q gi|254780265|r 1 MSRRRRAVVREVLPDPKFSDFVVAKFMNAIMYGGKKSVAVSIVYGAFDLVEKKEKKDPVALFRQALINVTPQFEVRTRRV 80 (156)
Q Consensus 1 m~Rr~~~~kr~~~pD~~y~~~lv~kliN~lMk~GKK~~A~kIv~~al~~I~~~~~~npi~il~~Ai~n~~P~~evk~~r~ 80 (156)
|+|+..+.+++.++|+.|+|+||++|+|++|++|||++|++|++.||++|+..|++||++||++||+||+|.+||+++++
T Consensus 51 ~~~~~~~~k~~~~~~~~~~d~lv~klin~~m~~GKK~~A~~iv~~a~~~I~~~t~~nPi~vl~~AI~N~~P~~ev~~~~~ 130 (204)
T 2zkq_g 51 HSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGR 130 (204)
T ss_dssp ------------CCCHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHSCSCEEEEEEE
T ss_pred CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEEE
T ss_conf 42425553120122146999999999998874547889999999999999986189906889999980364304588753
Q ss_pred CCCCEECEEECCHHHHHHHHHHHHHHHHHHCC---CCCHHHHHHHHHHHHHCCCCC--CEECHHHHHHHHHHHH
Q ss_conf 46300000104857999999999999998579---999899999999999738887--2630788999999988
Q gi|254780265|r 81 GGAAYSVPGEITSKRSQALAIRWLIMAARKRN---ETTMIDRLGGEIIDAANNRGV--AVRKREETHKVAEANR 149 (156)
Q Consensus 81 gG~~yqvP~~i~~~r~~~lAirWii~~a~~r~---~~~~~~~La~Eii~A~~~~g~--aikkK~elhk~A~aNR 149 (156)
||.+||||++|++.||+++|||||+++|++++ .++|+++||+||++|++|+|. |++||+|+||+|+|||
T Consensus 131 gG~~~~vPv~is~~rr~~lAirwil~~ar~~~~~~~k~~~~~La~Eii~A~~~~g~s~aikKKeelhk~AeaNR 204 (204)
T 2zkq_g 131 AGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 204 (204)
T ss_dssp TTEEEEEEEC-CHHHHHHHHHHHHHHHHHHHHHHSSSCHHHHHHHHHC-CTTCCC-CHHHHHHHHHHHHHHHCC
T ss_pred CCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHCC
T ss_conf 58326600423818999999999999998742579886999999999999808899621324788999998568