HHSEARCH alignment of GI: 254780265 and SCOP domain: d1rssa_

Alignment
>d1rssa_ a.75.1.1 (A:) Ribosomal protein S7 {Thermus thermophilus [TaxId: 274]}
Probab=100.00  E-value=0  Score=368.01  Aligned_cols=145  Identities=46%  Similarity=0.849  Sum_probs=143.8

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCEECEEEC
Q ss_conf             79997437879999999997669599999999999986674248863899999998427540477875246300000104
Q gi|254780265|r   12 VLPDPKFSDFVVAKFMNAIMYGGKKSVAVSIVYGAFDLVEKKEKKDPVALFRQALINVTPQFEVRTRRVGGAAYSVPGEI   91 (156)
Q Consensus        12 ~~pD~~y~~~lv~kliN~lMk~GKK~~A~kIv~~al~~I~~~~~~npi~il~~Ai~n~~P~~evk~~r~gG~~yqvP~~i   91 (156)
                      +.|||+|+|++|++|||+||++|||++|++|++++|++|++++++||+++|++||+|++|.+||+++++||++||||+++
T Consensus         1 ~~pdp~y~d~lv~k~in~lMk~GKK~~A~~iv~~al~~i~~~~~~npi~vl~~Ai~n~~P~~evk~~r~gG~~~~vPv~i   80 (145)
T d1rssa_           1 LQPDLVYGDVLVTAFINKIMRDGKKNLAARIFYDACKIIQEKTGQEPLKVFKQAVENVKPRMEVRSRRVGGANYQVPMEV   80 (145)
T ss_dssp             CCCCTTTCCHHHHHHHHHHCCTTCHHHHHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHCCSEEEEEEEETTEEEEEEEEC
T ss_pred             CCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCEEEEECC
T ss_conf             98998779889999999987624699999999999998887135760899999986352102014466377002530046


Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHCCCC
Q ss_conf             85799999999999999857999989999999999973888726307889999999888532569
Q gi|254780265|r   92 TSKRSQALAIRWLIMAARKRNETTMIDRLGGEIIDAANNRGVAVRKREETHKVAEANRAFSHYRW  156 (156)
Q Consensus        92 ~~~r~~~lAirWii~~a~~r~~~~~~~~La~Eii~A~~~~g~aikkK~elhk~A~aNRa~ah~Rw  156 (156)
                      ++.||++||||||+++|++|++++|+++||+||++|++|+|.|++||+|+||+|++||||+||||
T Consensus        81 ~~~rr~~lAirwil~aa~~r~~k~~~~~La~Eii~A~~~~g~aikkK~e~hK~A~aNRa~ah~Rw  145 (145)
T d1rssa_          81 SPRRQQSLALRWLVQAANQRPERRAAVRIAHELMDAAEGKGGAVKKKEDVERMAEANRAYAHYRW  145 (145)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSSCSSHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHCC-----CSCC
T ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCC
T ss_conf             87899999999999999864999899999999999982888654408889999999774611379


SCOP domain information

class: All alpha proteins
fold: Ribosomal protein S7
superfamily: Ribosomal protein S7
family: Ribosomal protein S7
domain: Ribosomal protein S7
species: Thermus thermophilus [TaxId: 274]