PSIBLAST alignment of GI: 254780265 and protein with PDB id: 1vs5
gi|116666554|pdb|1VS5|G Chain G, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. Length = 179
>gi|116666606|pdb|1VS7|G Chain G, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. Length = 179
Score = 217 bits (553), Expect = 4e-55, Method: Composition-based stats.
Identities = 80/156 (51%), Positives = 108/156 (69%)
Query: 1 MSRRRRAVVREVLPDPKFSDFVVAKFMNAIMYGGKKSVAVSIVYGAFDLVEKKEKKDPVA 60
M RRR R++LPDPKF ++AKF+N +M GKKS A SIVY A + + ++ K +
Sbjct: 1 MPRRRVIGQRKILPDPKFGSELLAKFVNILMVDGKKSTAESIVYSALETLAQRSGKSELE 60
Query: 61 LFRQALINVTPQFEVRTRRVGGAAYSVPGEITSKRSQALAIRWLIMAARKRNETTMIDRL 120
F AL NV P EV++RRVGG+ Y VP E+ R ALA+RW++ AARKR + +M RL
Sbjct: 61 AFEVALENVRPTVEVKSRRVGGSTYQVPVEVRPVRRNALAMRWIVEAARKRGDKSMALRL 120
Query: 121 GGEIIDAANNRGVAVRKREETHKVAEANRAFSHYRW 156
E+ DAA N+G AV+KRE+ H++AEAN+AF+HYRW
Sbjct: 121 ANELSDAAENKGTAVKKREDVHRMAEANKAFAHYRW 156