RPSBLAST alignment of GI: 254780265 and protein with PDBid: 2noq

>2noq_F L10A, 40S ribosomal protein S5; IRES RNA, ribosome, translation, internal initiation; 7.30A {Saccharomyces cerevisiae} PDB: 1s1h_G Length = 150

 Score =  126 bits (317), Expect = 2e-30
 Identities = 39/143 (27%), Positives = 70/143 (48%), Gaps = 9/143 (6%)

Query: 16  PKFSDFVVAKFMNAIMY----GGKKSVAVSIVYGAFDLVEKKEKKDPVALFRQALINVTP 71
            K    ++ +  N++M      GKK  AV I+    D++     ++P+ +   A+ N  P
Sbjct: 8   RKAQCPIIERLTNSLMMNGRNNGKKLKAVRIIKHTLDIINVLTDQNPIQVVVDAITNTGP 67

Query: 72  QFEVRTRRVGGAAYSVPGEITSKRSQALAIRWLIMAARK---RNETTMIDRLGGEIIDAA 128
           + +      GGAA     +++  R    AI  L + AR+   RN  T+ + L  E+I+AA
Sbjct: 68  REDTTRVGGGGAARRQAVDVSPLRRVNQAIALLTIGAREAAFRNIKTIAETLAEELINAA 127

Query: 129 NNRG--VAVRKREETHKVAEANR 149
                  A++K++E  +VA++NR
Sbjct: 128 KGSSTSYAIKKKDELERVAKSNR 150