HHsearch alignment of GI: 254780266 and MMDB domain: 2zkq_l_
>2zkq_l (l:) 40S ribosomal protein S23E; protein-RNA complex, 40S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris} PDB: 1s1h_L
Probab=100.00 E-value=0 Score=321.39 Aligned_cols=115 Identities=27% Similarity=0.503 Sum_probs=103.2
Q ss_pred CCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEEC-CCCEEEEEECCCC--CCCCC
Q ss_conf 95502354268737864666677000686212478756751845674424328899966-9969999807888--75464
Q gi|254780266|r 1 MPTVNQLIRKPRKGSFRACAKVTALRGNPQKRGVCLRVYTVTPKKPNSALRKVIKARLT-SGVEVIAYVPGEG--HNLQE 77 (124)
Q Consensus 1 MpTinQlir~~Rkk~~~~~~K~~~L~~~PqkkGVclkv~~~~PKKPNSA~RKvarV~Ls-ng~~v~ayIPGeG--hnlqe 77 (124)
|.|++|.....+ ....+.++++|++|||++|||++++++||||||||+||||+|+|+ ||++||||||||| |||||
T Consensus 19 ~~~~~~~~~~r~--~~~~k~k~~~l~g~Pq~kGivl~~~~~~pKKPNSA~RK~arV~L~~Ngk~vtAyIPGeG~~hnlqE 96 (143)
T 2zkq_l 19 DQKWHDKQYKKA--HLGTALKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEE 96 (143)
T ss_dssp -------CCCSC--CCCCCCCCCCSTTCSCEEEEEEEEEEEECCTTCCCEEEEEEEEESGGGCEEEEECCSSCSSCCCCT
T ss_pred HHCCCCCHHHHH--HCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHEEEEEEEECCCEEEEEECCCCCCCCCCCC
T ss_conf 630012046665--404430258344894042478999984257887002226899990599799999179853033453
Q ss_pred CCEEEEEC-----CCCCCCCCCEEEEEECCCCC-CCCCCCCCCCCC
Q ss_conf 67899953-----78388887547898040014-433420012112
Q gi|254780266|r 78 HSVVMLCG-----GRVKDLPGVKYRVIRGVLDA-QGVKNRKQARSR 117 (124)
Q Consensus 78 hs~VLvrG-----Grv~DlPGVry~ivRG~~D~-~gv~~Rk~~RSk 117 (124)
||+||||| ||++|||||+||||||+||+ .++.+|+++|||
T Consensus 97 hs~VlVrG~G~~gGrv~DLPGVrykvIrg~~d~l~~v~~rk~~rsk 142 (143)
T 2zkq_l 97 NDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKGKKERPR 142 (143)
T ss_dssp TCCEEECSSSSSSCCBTTBTTCCEECCTTSTTSCSTTTTCCCCC--
T ss_pred CCEEEEEECCCCCCCCCCCCCEEEEEEEECCCCHHHHHCCCCCCCC
T ss_conf 6489998467467766889972799999758119998603130589