PSIBLAST alignment of GI: 254780266 and protein with PDB id: 2zkq
gi|187609265|pdb|2ZKQ|LL Chain l, Structure Of A Mammalian Ribosomal 40s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map Length = 143
Score = 87.8 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 11/119 (9%)
Query: 9 RKPRKGSFRACAKVTALRGNPQKRGVCLRVYTVTPKKPNSALRKVIKARL-TSGVEVIAY 67
++ +K K G +G+ L V K+PNSA+RK ++ +L +G ++ A+
Sbjct: 25 KQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAF 84
Query: 68 VPGEG--HNLQEHSVVML-----CGGRVKDLPGVKYRVIR--GVLDAQGVKNRKQA-RS 116
VP +G + ++E+ V++ G V D+PGV+++V++ V K +K+ RS
Sbjct: 85 VPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKGKKERPRS 143