HHsearch alignment for GI: 254780267 and conserved domain: COG1566
>COG1566 EmrA Multidrug resistance efflux pump [Defense mechanisms].
Probab=96.97 E-value=0.00084 Score=43.48 Aligned_cols=34 Identities=38% Similarity=0.614 Sum_probs=25.6
Q ss_pred EEECCCCCEEEEEECCCCCCCCCCCEEEEEEECC
Q ss_conf 9998998199999848986836997299995347
Q gi|254780267|r 135 HIVAPCSGKVQDINVKDGQSVEYGDALLVLEKTG 168 (171)
Q Consensus 135 ~I~a~~~G~I~~i~v~~G~~V~~gq~L~~i~~~~ 168 (171)
T Consensus 55 ~Iap~VsG~V~eV~V~dnq~Vk~Gd~L~~iD~~~ 88 (352)
T COG1566 55 PIAPQVSGRVTEVNVKDNQLVKKGDVLFRIDPRD 88 (352)
T ss_pred EECCCCCEEEEEEEECCCCEECCCCEEEEECCHH
T ss_conf 9837673589999916898851897689989578