HHsearch alignment for GI: 254780267 and conserved domain: COG1566
>COG1566 EmrA Multidrug resistance efflux pump [Defense mechanisms].
Probab=94.48 E-value=0.051 Score=32.67 Aligned_cols=31 Identities=23% Similarity=0.388 Sum_probs=16.4
Q ss_pred CCEEEECCCEEEEEECCCCCCCEECCCCCEEECCEEEE
Q ss_conf 62687046256774036764100012442010434899
Q gi|254780267|r 89 YHTVTSPMVGTAYLASSPGSDPFVNKGNLVVEGQTLLI 126 (171)
Q Consensus 89 ~~~I~SPmvGtfy~~psP~~~~~V~vGd~Vk~G~~l~i 126 (171)
T Consensus 208 ~T~IrAP~dG~V-------~~~~v~~G~~V~~G~~l~a 238 (352)
T COG1566 208 RTVIRAPVDGYV-------TNLSVRVGQYVSAGTPLMA 238 (352)
T ss_pred CCEEECCCCCEE-------EEECCCCCCEECCCCCEEE
T ss_conf 789987789669-------7003557875048973499